•  Graduate School of Science and Engineering
•  Graduate School of Bioscience and Biotechnology
•  Interdisciplinary Graduate School of Science and Engineering
•  Graduate School of Information Science and Engineering
•  Graduate School of Decision Science and Technology
•  Graduate School of Innovation Management
•  Faculty of Science
•  Faculty of Engineering
•  Chemical Resources Laboratory
•  Resources Recycling Process Laboratoty
•  Precision and Intelligence Laboratory
•  Photonics Integration System Research Center
•  Secure Device Center
•  Materials and Structures Laboratory
•  Secure Materials Research Center
•  Research Laboratory for Nuclear Reactors
•  Imaging Science and Engineering Laboratory
•  Frontier Research Center
•  Solution Science Research Laboratory
•  Materials Research Center for Element Strategy
•  Global Edge Institute
•  The Museum, Tokyo Institute of Technology
•  Earth-Life Science Institute
•  イノベーション人材養成機構
•  Program for Leading Graduate Schools
•  Health Service Center
•  Global Scientific Information and Computing Center
•  Research Center for Educational Facilities
•  Volcanic Fluid Resarch Center
•  International Student Center
•  Quantum Nanoelectronics Research Center
•  Foreign Language Research and Teaching Center
•  Center for Biological Resources and Informatics
•  Center for Liberal Arts
•  Radiation Research and Management Center
•  Research Center for Carbon Recycling and Energy
•  Center for Research and Development of Educational Technology
•  Research Center for Low Temperature Physics
•  International Research Center of Macromolecular Science
•  Center for Urban Earthquake Engineering
•  Collaboration Center for Design and Manufacturing (CODAMA)
•  Bio-Frontier Research Center
•  Center for Agent-Based Social Systems Sciences
•  Center for Research into Innovative Nuclear Energy Systems
•  Super Mechano-System Innovation and Development Center
•  Innovative Research Initiatives
•  Student Services Center
•  Center for the Study of World Civilizations
•  Career Advancement Professional School
•  ICE Cube Center
•  Educational Planning Office
•  International Office
•  Office of Industry Liaison
•  General Safety Management Center
•  Center for Public Information
•  Institute Management Center
•  Gender Equality Center
•  Research Project Support Center
•  Energy Conservation Promotion Office
•  University Contents Utilization Center
•  Support Office for Promotion of Global Human Resource Development
•  High School of Science and Technology
•  International Affairs Department
•  Student Service Department

Obsolete Organization

•  Imaging Science and Engineering Laboratory
•  Microsystem Research Center
•  Integrated Research Institute
•  Productive Leader Incubation Platform
•  Research Center for Educational Facilities
•  Frontier Research Center
•  The Centennial Hall
•  Center for Advanced Materials Analysis