"Ai Shinobu,Kazuhiro Takemura,Nobuyuki Matubayasi,Akio Kitao","Refining evERdock: Improved selection of good protein-protein complex models achieved by MD optimization and use of multiple conformations",,"The Journal of Chemical Physics",,"  149","  19","  195101",2018,Nov.
"Hisham M. Dokainish,Akio Kitao","Similarities and Differences between Thymine(6?4)Thymine/Cytosine DNA Lesion Repairs by Photolyases",,"The Journal of Physical Chemistry B",,"  122","  36","  8537-8547",2018,Aug.
"Kazuhiro Takemura,Chika Sato,Akio Kitao","ColDock: Concentrated Ligand Docking with All-Atom Molecular Dynamics Simulation",,"The Journal of Physical Chemistry B",,"  122","  29","  7191-7200",2018,July
"Satoshi Yamashita,Misao Mizuno,Duy Phuoc Tran,Hisham Dokainish,Akio Kitao,Yasuhisa Mizutani","Vibrational Energy Transfer from Heme through Atomic Contacts in Proteins",,"The Journal of Physical Chemistry B",,"Vol. 122","No. 22","pp. 5877-5884",2018,June
"Mizuki Tabata,Hisham Dokainish,Keisuke Yamaguchi,Akio Kitao,Shun-ichi Ishiuchi,Masaaki Fujii","GAS PHASE SPECTROSCOPY ON HYDRATED CLUSTERS OF OXYTOCIN BY ELECTROSPRAY IONIZATION / COLD ION TRAP TECHNIQUE","International Symposium on Molecular Spectroscopy",,,,,,2018,June
"Akio Kitao,Hiroaki Hata","Molecular dynamics simulation of bacterial flagella",,"Biophysical Reviews",,"  10","  2","  617-629",2018,Apr.
"Kazuhiro Takemura,Nobuyuki Matubayasi,Akio Kitao","Binding free energy analysis of protein-protein docking model structures by evERdock",,"The Journal of Chemical Physics",,"  148","  10","  105101",2018,Mar.
"Jacob B. Swadling,Akio Kitao","Origins of biological function in DNA and RNA hairpin loop motifs from replica exchange molecular dynamics simulation",,"Physical Chemistry Chemical Physics",,"Vol. 20","No. 5","pp. 2990-3001",2018,Feb.
"Duy Phuoc Tran,Akio Kitao","Protein-Ligand Dissociation Simulated by Parallel Cascade Selection Molecular Dynamics",,"Journal of Chemical Theory and Computation",,"Vol. 14","No. 1","pp. 404-417",2018,Jan.