@article{CTT100884034, author = {Ryo Nakayama and Ryota Shimizu and Taishi Haga and Takefumi Kimura and Yasunobu Ando and Shigeru Kobayashi and Nobuaki Yasuo and Masakazu Sekijima and Taro Hitosugi}, title = {Tuning of Bayesian optimization for materials synthesis: simulation of the one-dimensional case}, journal = {Science and Technology of Advanced Materials: Methods}, year = 2022, } @article{CTT100884036, author = {Takayuki Kimura and Nobuaki Yasuo and Masakazu Sekijima and Brooke Lustig}, title = {Statistical potentials for RNA-protein interactions optimized by CMA-ES}, journal = {Journal of Molecular Graphics and Modelling}, year = 2022, } @article{CTT100884035, author = {Kazuki Z. Yamamoto and Nobuaki Yasuo and Masakazu Sekijima}, title = {Screening for Inhibitors of Main Protease in SARS-CoV-2: In Silico and In Vitro Approach Avoiding Peptidyl Secondary Amides}, journal = {Journal of Chemical Information and Modeling}, year = 2022, } @article{CTT100884037, author = {Daiki Erikawa and Nobuaki Yasuo and Masakazu Sekijima}, title = {MERMAID: an open source automated hit-to-lead method based on deep reinforcement learning}, journal = {Journal of Cheminformatics}, year = 2021, } @article{CTT100876904, author = {Nobuaki Yasuo and Takashi Ishida and Masakazu Sekijima}, title = {Computer aided drug discovery review for infectious diseases with case study of anti-Chagas project}, journal = {}, year = 2021, } @article{CTT100834879, author = {Kou Miyamoto and Nobuaki Yasuo and Yinli Chen and Daiki Sato and Jinhua She}, title = {Determination of LQR weights by Bayesian optimization method using multiple earthquake waves}, journal = {Proceedings of IEEE 46th Annual Conference of the IEEE Industrial Electronics Society(IECON2020)}, year = 2020, } @article{CTT100884038, author = {Yu Miyazaki and Ryo Nakayama and Nobuaki Yasuo and Yuki Watanabe and Ryota Shimizu and Daniel M. Packwood and Kazunori Nishio and Yasunobu Ando and Masakazu Sekijima and Taro Hitosugi}, title = {Bayesian statistics-based analysis of AC impedance spectra}, journal = {AIP Advances}, year = 2020, } @article{CTT100813782, author = {Ryunosuke Yoshino and Nobuaki Yasuo and Masakazu Sekijima}, title = {Molecular Dynamics Simulation reveals the mechanism by which the Influenza Cap-dependent Endonuclease acquires resistance against Baloxavir marboxil}, journal = {Scientific Reports}, year = 2019, } @article{CTT100810746, author = {Shuntaro Chiba and Masahito Ohue and Anastasiia Gryniukova and Petro Borysko and Sergey Zozulya and Nobuaki Yasuo and Ryunosuke Yoshino and Kazuyoshi Ikeda and Woong-Hee Shin and Daisuke Kihara and Mitsuo Iwadate and Hideaki Umeyama and Takaaki Ichikawa and Reiji Teramoto and Kun-Yi Hsin and Vipul Gupta and Hiroaki Kitano and Mika Sakamoto and Akiko Higuchi and Nobuaki Miura and Kei Yura and Masahiro Mochizuki and Chandrasekaran Ramakrishnan and A. Mary Thangakani and D. Velmurugan and M. Michael Gromiha and Itsuo Nakane and Nanako Uchida and Hayase Hakariya and Modong Tan and Hironori Nakamura and Shogo Suzuki and Tomoki Ito and Masahiro Kawatani and Kentaroh Kudoh and Sakurako Takashina and Kazuki Yamamoto and Yoshitaka Moriwaki and Keita Oda and Daisuke Kobayashi and Tatsuya Okuno and Shintaro Minami and George Chikenji and Philip Prathipati and Chioko Nagao and Attayeb Mohsen and Mari Ito and Kenji Mizuguchi and Teruki Honma and Takashi Ishida and Takatsugu Hirokawa and Yutaka Akiyama and Masakazu Sekijima.}, title = {A prospective compound screening contest identified broader inhibitors for Sirtuin 1}, journal = {Scientific Reports}, year = 2019, } @article{CTT100884039, author = {Nobuaki Yasuo and Masakazu Sekijima}, title = {Improved Method of Structure-Based Virtual Screening via Interaction-Energy-Based Learning}, journal = {Journal of Chemical Information and Modeling}, year = 2019, } @article{CTT100770123, author = {Kou Miyamoto and Jinhua She and Daiki Sato and Nobuaki Yasuo}, title = {Automatic determination of LQR weighting matrices for active structural control}, journal = {Engineering Structures}, year = 2018, } @article{CTT100783049, author = {Wakui, N. and Yoshino, R. and Yasuo, N. and Ohue, M. and Sekijima, M.}, title = {Exploring the selectivity of inhibitor complexes with Bcl-2 and Bcl-XL: A molecular dynamics simulation approach}, journal = {Journal of Molecular Graphics and Modelling}, year = 2018, } @article{CTT100766244, author = {Shuntaro Chiba and Takashi Ishida and Kazuyoshi Ikeda and Masahiro Mochizuki and Reiji Teramoto and Y-h. Taguchi and Mitsuo Iwadate and Hideaki Umeyama and Chandrasekaran Ramakrishnan and A. Mary Thangakani and D. Velmurugan and M. Michael Gromiha and Tatsuya Okuno and Koya Kato and Shintaro Minami and George Chikenji and Shogo D. Suzuki and Keisuke Yanagisawa and Woong-Hee Shin and Daisuke Kihara and Kazuki Z. Yamamoto and Yoshitaka Moriwaki and Nobuaki Yasuo and Ryunosuke Yoshino and Sergey Zozulya and Petro Borysko and Roman Stavniichuk and Teruki Honma and Takatsugu Hirokawa and Yutaka Akiyama and Masakazu Sekijima}, title = {An iterative compound screening contest method for identifying target protein inhibitors using the tyrosine-protein kinase Yes}, journal = {Scientific Reports}, year = 2017, } @article{CTT100766242, author = {Ryunosuke Yoshino and Nobuaki Yasuo and Yohsuke Hagiwara and Takashi Ishida and Daniel Ken Inaoka and Yasushi Amano and Yukihiro Tateishi and Kazuki Ohno and Ichiji Namatame and Tatsuya Niimi and Masaya Orita and Kiyoshi Kita and Yutaka Akiyama and Masakazu Sekijima}, title = {In silico, in vitro, X-ray crystallography, and integrated strategies for discovering spermidine synthase inhibitors for Chagas disease}, journal = {Scientific Reports}, year = 2017, } @article{CTT100709036, author = {Shuntaro Chiba and Kazuyoshi Ikeda and Takashi Ishida and M. Michael Gromiha and Y-h. Taguchi and Mitsuo Iwadate and Hideaki Umeyama and Kun-Yi Hsin and Hiroaki Kitano and Kazuki Yamamoto and Nobuyoshi Sugaya and Koya Kato and Tatsuya Okuno and George Chikenji and Masahiro Mochizuki and Nobuaki Yasuo and Ryunosuke Yoshino and Keisuke Yanagisawa and Tomohiro Ban and Reiji Teramoto and Chandrasekaran Ramakrishnan and A. Mary Thangakani and D. Velmurugan and Philip Prathipati and Junichi Ito and Yuko Tsuchiya and Kenji Mizuguchi and Teruki Honma and Takatsugu Hirokawa and Yutaka Akiyama and Masakazu Sekijima}, title = {Identification of potential inhibitors based on compound proposal contest: Tyrosine-protein kinase Yes as a target}, journal = {Scientific Reports}, year = 2015, } @article{CTT100709056, author = {Ryunosuke Yoshino and Nobuaki Yasuo and Daniel Ken Inaoka and Yohsuke Hagiwara and Kazuki Ohno and Masaya Orita and Masayuki Inoue and Tomoo Shiba and Shigeharu Harada and Teruki Honma and Emmanuel Oluwadare Balogun and Josmar Rodrigues da Rocha and Carlos Alberto Montanari and Kiyoshi Kita and Masakazu Sekijima}, title = {Pharmacophore Modeling for Anti-Chagas Drug Design Using the Fragment Molecular Orbital Method}, journal = {PLOS ONE}, year = 2015, } @inproceedings{CTT100846498, author = {中山 亮 and 清水 亮太 and 芳賀 太史 and 木村 武史 and 安藤 康伸 and 安尾 信明 and 関嶋 政和 and 一杉 太郎}, title = {物質合成に適したベイズ最適化のハイパーパラメータの探索}, booktitle = {}, year = 2021, } @inproceedings{CTT100851779, author = {千葉 真人 and 酒向 正己 and 林 慶浩 and 安藤 慎治 and 安尾 信明 and 関嶋 政和 and 川内 進}, title = {量子化学計算と機械学習による有機高分子の屈折率予測}, booktitle = {高分子学会予稿集}, year = 2020, } @inproceedings{CTT100837745, author = {酒向 正己 and 千葉 真人 and 安尾 信明 and 渡部 一貴 and 瀧本 啓人 and 一杉 太郎 and 関嶋 政和}, title = {Pb-free perovskite 化合物の bandgap 予測と合成結果}, booktitle = {}, year = 2020, } @inproceedings{CTT100818236, author = {中山 亮 and 宮崎 優 and 安尾 信明 and 渡邊 佑紀 and 清水 亮太 and 西尾 和記 and 安藤 康伸 and 関嶋 政和 and 一杉 太郎}, title = {ベイズ統計に基づいた単純な電気化学素子のインピーダンススペクトル解析}, booktitle = {}, year = 2020, } @inproceedings{CTT100793318, author = {宮崎 優 and 安尾 信明 and 渡邊 佑紀 and 中山 亮 and 清水 亮太 and 西尾 和記 and 安藤 康伸 and 関嶋 政和 and 一杉 太郎}, title = {ベイズ統計を用いた客観的な電気化学インピーダンススペクトル解析}, booktitle = {}, year = 2019, } @inproceedings{CTT100793334, author = {宮崎 優 and 安尾 信明 and 渡邊 佑紀 and 中山 亮 and 清水 亮太 and 西尾 和記 and 安藤 康伸 and 関嶋 政和 and 一杉 太郎}, title = {ベイズ推定を用いた客観的な電気化学インピーダンス解析}, booktitle = {}, year = 2019, } @inproceedings{CTT100783054, author = {Naoki Wakui and Ryunosuke Yoshino and Nobuaki Yasuo and Masahito Ohue and Masakazu Sekijima}, title = {Exploring the selectivity of inhibitor complexes with Bcl-2 and Bcl-XL: a molecular dynamics simiulation approach}, booktitle = {}, year = 2017, } @misc{CTT100860420, author = {関嶋政和 and LIGEN and 安尾信明}, title = {化合物生成装置、化合物生成方法、学習装置、学習方法及びプログラム}, howpublished = {公開特許}, year = 2021, month = {}, note = {特願2020-063193(2020/03/31), 特開2021-068410(2021/04/30)} } @misc{CTT100840043, author = {関嶋政和 and 依田洸 and 安尾信明}, title = {立体構造判定装置、立体構造判定方法、立体構造の判別器学習装置、立体構造の判別器学習方法及びプログラム}, howpublished = {登録特許}, year = 2022, month = {}, note = {特願2019-015086(2019/01/31), 特開2020-123189(2020/08/13), 特許第7168979号(2022/11/01)} }