"Rei Kajitani,Hideki Noguchi,Yasuhiro Gotoh,Yoshitoshi Ogura,Dai Yoshimura,Miki Okuno,Atsushi Toyoda,Tomomi Kuwahara,Tetsuya Hayashi,Takehiko Itoh","MetaPlatanus: a metagenome assembler that combines long-range sequence links and species-specific features",,"Nucleic Acids Research",,,,"  gkab831",2021,Sept.
"Naohisa Wada,Hideaki Yuasa,Rei Kajitani,Yasuhiro Gotoh,Yoshitoshi Ogura,Dai Yoshimura,Atsushi Toyoda,Sen-Lin Tang,Yukihiro Higashimura,Hugh Sweatman,Zac Forsman,Omri Bronstein,Gal Eyal,Nalinee Thongtham,Takehiko Itoh,Tetsuya Hayashi,Nina Yasuda","A ubiquitous subcuticular bacterial symbiont of a coral predator, the crown-of thorns starfish, in the Indo-Pacifc",,"Microbiome",,"Vol. 8","No. 1","  123",2020,Aug.
"Rei Kajitani,Dai Yoshimura,Yoshitoshi Ogura,Yasuhiro Gotoh,Tetsuya Hayashi,Takehiko Itoh","Platanus_B: an accurate de novo assembler for bacterial genomes using an iterative error- removal process",,"DNA Research",,"  27","  3",,2020,June
"服部淳,吉村大,谷口愛樹,林哲也,伊藤武彦","Comprehensive detection of insertion sequences in bacterial genomes","第93回日本細菌学会総会",,,,,,2020,Feb.
"服部 淳,伊藤 武彦,吉村 大","Comprehensive detection of insertion sequences in bacterial genomes","第8回生命医薬情報学連合大会",,,,,,2019,Sept.
"吉村大","高精度ゲノム解析手法の確立による大腸菌O157の大規模比較研究",,,,,,,2019,June
"吉村大","高精度ゲノム解析手法の確立による大腸菌O157の大規模比較研究",,,,,,,2019,June
"吉村大","高精度ゲノム解析手法の確立による大腸菌O157の大規模比較研究",,,,,,,2019,June
"吉村大","高精度ゲノム解析手法の確立による大腸菌O157の大規模比較研究",,,,,,,2019,June
"Dai Yoshimura,Rei Kajitani,Yasuhiro Gotoh,Katsuyuki Katahira,Miki Okuno,Yoshitoshi Ogura,Tetsuya Hayashi,Takehiko Itoh","Evaluation of SNP calling methods for closely related bacterial isolates and a novel high-accuracy pipeline: BactSNP",,"Microbial Genomics",,,,"  e000261",2019,May
"Osamu Sawada,Yasuhiro Gotoh,Takako Taniguchi,Shota Furukawa,Dai Yoshimura,Satomi Sasaki,Haruki Shida,Yoshihiro Kusunoki,Tsuyoshi Yamamura,Ken Furuya,Takehiko Itoh,Tetsuya Horita,Tetsuya Hayashi,Naoaki Misawa","Genome Sequencing Verifies Relapsed Infection of  Helicobacter cinaedi",,"Open Forum Infectious Diseases",,"Vol. 6","No. 5",,2019,Apr.
"Rei Kajitani,Dai Yoshimura,Miki Okuno,Yohei Minakuchi,Hiroshi Kagoshima,Asao Fujiyama,Kaoru Kubokawa,Yuji Kohara,Atsushi Toyoda,Takehiko Itoh","Platanus-allee is a de novo haplotype assembler enabling a comprehensive access to divergent heterozygous regions",,"Nature Communications",,,,"  1702",2019,Apr.
"吉村?,後藤 恭宏,小椋義俊,林哲也,伊藤武彦","全ゲノム配列情報を?いた近縁菌株間?精度SNP検出パイプラインBactSNPの開発","第12回日本ゲノム微生物学会年会",,,,,,2018,Mar.
"湯淺英知,梶谷嶺,?橋和希,吉村大,小椋義俊,Zac Forsman,Nalinee Thongtham,Niphon Phongsuwan,Coralie Taquet,Marc Taquet,林哲也,伊藤武彦,安田仁奈","異所的に種分化したオニヒトデ種間での受精遺伝子の進化","日本サンゴ礁学会第20回大会",,,,,,2017,Nov.
"梶谷嶺,吉村大,奥野未来,豊田敦,伊藤武彦","Platanus2: a de novo haplotype assembler enabling comprehensive accesses to divergent heterozygous region","第6回生命医薬情報学連合大会（IIBMP2017）",,,,,,2017,Sept.
"森田有貴,奥野未来,吉村大,立花広太,梶谷嶺,古俣麻希子,白髭克彦,森川あすか,伊藤武彦","次世代シークエンサを用いたSLSTによるPropionibacterium acnesタイピング解析","第11回日本ゲノム微生物学会年会",,,,,,2017,Mar.
"吉村大,後藤恭宏,小椋義俊,梶谷嶺,奥野未来,林哲也,伊藤武彦","全ゲノム配列情報を用いた菌株間系統樹推定パイプラインの開発","第11回日本ゲノム微生物学会年会",,,,,,2017,Mar.
"梶谷嶺,小椋義俊,後藤恭宏,吉村大,奥野未来,林哲也,伊藤武彦","メタゲノムショットガンデータからの株ハプロタイプ配列構築手法の開発","第11回日本ゲノム微生物学会年会",,,,,,2017,Mar.
"後藤恭宏,片平雄之,吉村大,伊藤武彦,小椋義俊,林哲也","超高精度分子疫学解析で迫る病原菌の動態","第90回日本細菌学会総会",,,,,,2017,Mar.
"吉村大,後藤恭宏,小椋義俊,林哲也,伊藤武彦","ゲノム配列情報を用いた近縁菌株間高精度 SNP 検出手法の開発：病原菌感染経路推測への応用","第90回日本細菌学会総会",,,,,,2017,Mar.
"奥野未来,立花広太,吉村大,森田有貴,梶谷嶺,古俣麻希子,白髭克彦,森川あすか,伊藤武彦","皮膚常在細菌Propionibacterium acnesの全ゲノム比較解析","第11回日本ゲノム微生物学会年会",,,,,,2017,Mar.
"Arzuba Akter,Tadasuke Ooka,Yasuhiro Gotoh,Seigo Yamamoto,Hiromi Fujita,Fumio Terasoma,Kouji Kida,Masakatsu Taira,Fumiko Nakadouzono,Mutsuyo Gokuden,Manabu Hirano,Mamoru Miyashiro,Kouichi Inari,Yukie Shimazu,Kenji Tabara,Atsushi Toyoda,Dai Yoshimura,Takehiko Itoh,Tomokazu Kitano,Mitsuhiko P. Sato,Keisuke Katsura,Shakhinur Islam Mondal,Yoshitoshi Ogura,Shuji Ando,Tetsuya Hayashi","Extremely Low Genomic Diversity of Rickettsia japonica Distributed in Japan",,"Genome Biology and Evolution",,"Vol. 9","No. 1","pp. 124-133",2017,Jan.
"吉村大,後藤恭宏,小椋義俊,林哲也,伊藤武彦","次世代シークエンサを用いた菌株間 SNP 検出における問題点と検出プロトコルの構築","第10回日本ゲノム微生物学会年会",,,,,,2016,Mar.
"吉村大,後藤恭宏,小椋義俊,林哲也,伊藤武彦","全ゲノム配列情報を用いた近縁菌株の迅速高精度系統解析手法の開発：病原菌感染経路推測への応用","第89回日本細菌学会総会",,,,,,2016,Mar.
"吉村大,後藤恭宏,小椋義俊,林哲也,伊藤武彦","全ゲノム配列情報を用いた近縁菌株の迅速高精度系統解析手法の開発：病原菌感染経路推測への応用","第9回日本ゲノム微生物学会年会",,,,,,2015,Mar.