"大上雅史","数学と計算で探るタンパク質の出会いとネットワーク","サイエンスアゴラ2015 数学協働プログラム",,,,,,2015,Nov.
"鈴木翔吾,大上雅史,秋山泰","活性値情報のグループ化とランク学習による活性化合物予測","第18回情報論的学習理論ワークショップ (IBIS2015)",,,,,,2015,Nov.
"柳澤 渓甫,小峰 駿汰,大上 雅史,石田 貴士,秋山 泰","Fast pre-filtering for virtual screening based on ligand decomposition","第21回創剤フォーラム若手研究会",,,,,,2015,Nov.
"鈴木翔吾,大上雅史,秋山泰","活性値情報のグループ化を用いたランク学習による化合物スクリーニング","第21回創剤フォーラム若手研究会",,,,,,2015,Nov.
"伴 兼弘,大上 雅史,秋山 泰","Multiple Grids Arrangement for Improving Conformational Search of Protein-Ligand Docking and Its Application to Inverse Docking Problem","第21回創剤フォーラム若手研究会",,,,,,2015,Nov.
"大上雅史,松崎由理,石田貴士,秋山泰","タンパク質間相互作用予測システムMEGADOCKによるEGFRパスウェイ解析","第21回創剤フォーラム若手研究会",,,,,,2015,Nov.
"Yuri Matsuzaki,Masahito Ohue,Nobuyuki Uchikoga,Takashi Ishida,Yutaka Akiyama","MEGADOCK: A high-performance protein-protein interaction prediction software for petascale supercomputing environments","3nd IIT Madras ? Tokyo Tech Joint Symposium on Algorithms and Applications of Bioinformatics",,,,,,2015,Nov.
"Nobuyuki Uchikoga,Yuri Matsuzaki,Masahito Ohue,Takatsugu Hirokawa,Yutaka Akiyama","Analysis of protein docking decoys in terms of physicochemical properties of protein surfaces using rigid-body docking process","3nd IIT Madras ? Tokyo Tech Joint Symposium on Algorithms and Applications of Bioinformatics",,,,,,2015,Nov.
"Keisuke Yanagisawa,Shunta Komine,Masahito Ohue,Takashi Ishida,Yutaka Akiyama","Fast pre-filtering for virtual screening based on compound fragmentation","3nd IIT Madras ? Tokyo Tech Joint Symposium on Algorithms and Applications of Bioinformatics",,,,,,2015,Nov.
"Tomohiro Ban,Masahito Ohue,Yutaka Akiyama","Improving protein-ligand docking and inverse docking prediction by deepening conformation search on multiple grids","3nd IIT Madras ? Tokyo Tech Joint Symposium on Algorithms and Applications of Bioinformatics",,,,,,2015,Nov.
"Masahito Ohue,Takehiro Shimoda,Shuji Suzuki,Takashi Ishida,Yutaka Akiyama","A comparative study of GPU and MIC accelerations in fast Fourier transform-based protein-protein docking","3nd IIT Madras ? Tokyo Tech Joint Symposium on Algorithms and Applications of Bioinformatics",,,,,,2015,Nov.
"Keisuke Yanagisawa,Shunta Komine,Masahito Ohue,Takashi Ishida,Yutaka Akiyama","Fast pre-filtering for virtual screening based on compound decomposition","IIBMP2015",,,,,,2015,Oct.
"Tomohiro Ban,Masahito Ohue,Yutaka Akiyama","Multiple Grids Arrangement for Ligand Docking and Its Application to Inverse Docking Problem","IIBMP2015",,,,,,2015,Oct.
"Uchikoga, Nobuyuki,Masahito Ohue,Yuri Matsuzaki,Yutaka Akiyama","Post-docking analysis by physicochemical properties of protein-protein interactions generated from rigid-body docking processes","29th Annual Symposium of the Protein-Society","PROTEIN SCIENCE","WILEY-BLACKWELL","Vol. 24",,"pp. 253-253",2015,Oct.
"大上雅史,内古閑伸之,松崎由理,秋山泰","アミノ酸プロファイルによるタンパク質ペプチド複合体のポストドッキング解析","第53回日本生物物理学会年会",,,,,,2015,Sept.
"内古閑伸之,松崎由理,大上雅史,秋山泰","剛体アンサンブルドッキングによって得られた候補構造群における相互作用残基ペアの特徴の解析","第53回日本生物物理学会年会",,,,,,2015,Sept.
"大上雅史","大規模タンパク質間相互作用予測によるEGFR系解析","第4回育志賞研究発表会",,,,,,2015,Aug.
"鈴木翔吾,柳澤渓甫,大上雅史,石田貴士,秋山泰","SVMとDeep Learningに基づくヒトc-Yesキナーゼ阻害化合物の予測","情報処理学会 第42回バイオ情報学研究会","研究報告バイオ情報学（BIO）","情報処理学会","  2015-BIO-42","  36","  1-7",2015,June
"和久井直樹,大上雅史,千葉峻太朗,石田貴士,岩?博史,秋山泰","既知の活性／非活性化合物のドッキング解析によるバーチャルスクリーニングに適したタンパク質立体構造モデルの選択","情報処理学会 第42回バイオ情報学研究会","研究報告バイオ情報学（BIO）","情報処理学会","  2015-BIO-42","  60","  1-4",2015,June
"大上雅史,内古閑伸之,松崎由理,秋山泰","タンパク質間相互作用残基の物理化学的性質による単純化プロファイルを用いたポストドッキング解析","第15回日本蛋白質科学会年会",,,,,,2015,June
"大上雅史,根岸瑠美","「鍵はダイバーシティ」男女共同参画・若手支援シンポジウム報告",,"生物物理","一般社団法人生物物理学会","Vol. 55","No. 2","pp. 108-110",2015,Mar.
"Yuri Matsuzaki,Nobuyuki Uchikoga,Masahito Ohue,Yutaka Akiyama","Prediction of human-virus protein-protein interactions by exhaustive rigid docking.","Biophysical Society 59th Annual Meeting",,,,,,2015,Feb.
"Nobuyuki Uchikoga,Yuri Matsuzaki,Masahito Ohue,Takatsugu Hirokawa,Yutaka Akiyama","Analysis of amino acid properties in interaction surfaces of decoys generated by re-docking","Biophysical Society 59th Annual Meeting",,,,,,2015,Feb.
"Masahito Ohue,Takehiro Shimoda,Shuji suzuki,Yuri Matsuzaki,Takashi Ishida,Yutaka Akiyama","MEGADOCK 4.0: an ultra?high-performance protein-protein docking software for heterogeneous supercomputers","APBC 2015: The Thirteenth Asia Pacific Bioinformatics Conference",,,,,,2015,Jan.
"Takehiro Shimoda,Shuji Suzuki,Masahito Ohue,Takashi Ishida,Yutaka Akiyama.","Protein-Protein Docking on Hardware Accelerators : Comparison of GPU and MIC Architectures","The Thirteenth Asia-Pacific Bioinformatics Conference (APBC2015)","BMC Systems Biology","BioMed Central","Vol. 9","No. Suppl 1",,2015,Jan.