"Keisuke Yanagisawa,Shunta Komine,Shogo Suzuki,Masahito Ohue,Takashi Ishida,Yutaka Akiyama","ESPRESSO: An ultrafast compound pre-screening method based on compound decomposition","The 27th International Conference on Genome Informatics (GIW 2016)",,,,,,2016,Oct.
"Keisuke Yanagisawa,Shunta Komine,Shogo Suzuki,Masahito Ohue,Takashi Ishida,Yutaka Akiyama","ESPRESSO: An ultrafast compound pre-screening method with segmented compounds","Chem-Bio Informatics Society(CBI) Annual Meeting 2016",,,,,,2016,Oct.
"大上雅史","構造情報に基づくタンパク質間相互作用予測システムMEGADOCK","CBI学会2016年大会",,,,,,2016,Oct.
"Kazuki Yamamoto,Yoshitaka Moriwaki,Keita Oda,Masahito Ohue,Itsuo Nakane,Ryunosuke Yoshino,Hayase Hakariya,Tadaaki Mashimo,Mitsuhito Wada,Yoshifumi Fukunishi","Human insight in drug discovery: docking pose selection in protein-ligand docking and hit-compounds selection in structure-based virtual screening","Chem-Bio Informatics Society(CBI) Annual Meeting 2016",,,,,,2016,Oct.
"大上雅史","薬のタネ発見のための計算技術と創薬知BoF","第5回生命医薬情報学連合大会",,,,,,2016,Sept.
"Kota Goto,Kota Kasahara,Masahito Ohue,Haruki Nakamura,Yutaka Akiyama","Accelerating SHAKE Calculation of myPresto/omegagene Molecular Dynamics Simulation on CPU/GPU heterogeneous environment","Informatics in Biology, Medicine and Pharmacology 2016 (IIBMP2016)",,,,,,2016,Sept.
"Marina Yamasawa,Tomoya Fujii,Kota Goto,Masahito Ohue,Takashi Ishida,Kazuyuki Ishihara,Yutaka Akiyama","GPU/MPI Parallelization of Metagenomic Sequence Homology Search Tool and Its Application to Oral Metagenomics","Informatics in Biology, Medicine and Pharmacology 2016 (IIBMP2016)",,,,,,2016,Sept.
"Takanori Hayashi,Kazuki Nagasawa,Yuri Matsuzaki,Masahito Ohue,Yutaka Akiyama","MEGADOCK-WEB: a database of predicted protein-protein interactions and its web interface","Informatics in Biology, Medicine and Pharmacology 2016 (IIBMP2016)",,,,,,2016,Sept.
"Shogo Suzuki,Masahito Ohue,Yutaka Akiyama","Learning to Rank with Ignoring Meaningless Order and Its Application to Virtual Screening for Drug Discovery","Informatics in Biology, Medicine and Pharmacology 2016 (IIBMP2016)",,,,,,2016,Sept.
"Masahito Ohue,Yuki Yamamoto,Hiroyuki Sato,Takashi Matsushita,Yutaka Akiyama","MEGADOCK-Azure: High-performance protein-protein interaction prediction system on Microsoft Azure HPC","Informatics in Biology, Medicine and Pharmacology 2016 (IIBMP2016)",,,,,,2016,Sept.
"Keisuke Yanagisawa,Shunta Komine,Shogo Suzuki,Masahito Ohue,Takashi Ishida,Yutaka Akiyama","ESPRESSO: An ultrafast compound pre-screening method based on compound segmentation","Informatics in Biology, Medicine and Pharmacology 2016 (IIBMP2016)",,,,,,2016,Sept.
"大上雅史","計算で明らかにするタンパク質の出会いとネットワーク","FIT2016 第15回情報科学技術フォーラム",,,,,,2016,Sept.
"Kazuki Yamamoto,Yoshitaka Moriwaki,Keita Oda,Masahito Ohue,Itsuo Nakane,Ryunosuke Yoshino,Hayase Hakariya,Tadaaki Mashimo,Mitsuhito Wada,Yoshifumi Fukunishi","Human insight in drug discovery: docking pose selection in protein-ligand docking and hit-compounds selection in structure-based virtual screening","Informatics in Biology, Medicine and Pharmacology 2016 (IIBMP2016)",,,,,,2016,Sept.
"Nobuyuki Uchikoga,Yuri Matsuzaki,Masahito Ohue,Yutaka Akiyama","Specificity of broad protein interaction surfaces for proteins with multiple binding partners",,"Biophysics and Physicobiology","THE BIOPHYSICAL SOCIETY OF JAPAN","Vol. 13",,"pp. 105-115",2016,July
"柳澤 渓甫,小峰 駿汰,鈴木 翔吾,大上 雅史,石田 貴士,秋山 泰","フラグメント分割に基づく超高速化合物プレスクリーニング手法ESPRESSO","情報処理学会 第46回バイオ情報学研究会","研究報告バイオ情報学（BIO）","情報処理学会","  2016-BIO-46","  18","  1-7",2016,June
"鈴木 翔吾,大上 雅史,秋山 泰","活性値情報のグループ化とランク学習による化合物スクリーニング","情報処理学会 第46回バイオ情報学研究会","研究報告バイオ情報学（BIO）","情報処理学会","  2016-BIO-46","  26","  1-7",2016,June
"内古閑伸之,松崎由理,大上雅史,秋山泰","細菌走化性におけるタンパク質間相互作用面の解析","第16回日本蛋白質科学会年会",,,,,,2016,June
"後藤 公太,笠原 浩太,大上 雅史,中村 春木,秋山 泰","SHAKE法に着目した分子動力学ソフトウェアmyPresto/OmegageneのCPU・GPU混在環境における高速化","情報処理学会 第46回バイオ情報学研究会","研究報告バイオ情報学（BIO）","情報処理学会","  2016-BIO-46","  17","  1-7",2016,June
"大上雅史","学振申請書の書き方とコツ DC/PD獲得を目指す若者へ",,"学振申請書の書き方とコツ DC/PD獲得を目指す若者へ","講談社",,,,2016,Apr.
"藤井智也,角田将典,大上雅史,石田貴士,石原和幸,秋山泰","GPUを用いたメタゲノム配列相同性解析ツールのMPI並列化と応用",,"研究報告バイオ情報学（BIO）","情報処理学会","  2016-BIO-45","  3","  1-4",2016,Mar.
"根岸瑠美,大上雅史","そもそも「ポスドク問題」ってなんだろう？男女共同参画・若手支援シンポジウム報告",,"生物物理","一般社団法人生物物理学会","Vol. 56","No. 2","pp. 126-127",2016,Mar.
"山崎卓朗,大上雅史,秋山泰","タンパク質-化合物相互作用ネットワークのリンクマイニング","情報処理学会 第45回バイオ情報学研究会","研究報告バイオ情報学（BIO）","情報処理学会","  2016-BIO-45","  9","  1-7",2016,Mar.
"長澤一輝,松崎由理,大上雅史,秋山泰","タンパク質間相互作用予測結果データベース及び表示系の構築","情報処理学会 第45回バイオ情報学研究会","研究報告バイオ情報学（BIO）","情報処理学会","  2016-BIO-45","  2","  1-4",2016,Mar.
"Masahito Ohue,Yuri Matsuzaki,Nobuyuki Uchikoga,Takashi Ishida,Yutaka Akiyama","MEGADOCK 4.0: an ultra-high-performance protein-protein docking software for heterogeneous supercomputers","Biophysical Society 60th Annual Meeting",,,,,,2016,Feb.
"Nobuyuki Uchikoga,Yuri Matsuzaki,Masahito Ohue,Yutaka Akiyama","Analysis of Physico-Chemical Properties of Protein Docking Decoys Generated by Rigid-Body Docking","Biophysical Society 60th Annual Meeting",,,,,,2016,Feb.
"Masahito Ohue,Yutaka Akiyama","A rescoring method of protein-peptide docking prediction with amino acid profiles of rigid-body search results","The Fourteenth Asia Pacific Bioinformatics Conference (APBC2016)",,,,,,2016,Jan.