@article{CTT100908340,
  author = {Minoru Moriyama and Yudai Nishide and Takema Fukatsu and Minoru Moriyama and Yudai Nishide and Atsushi Toyoda and Takehiko Itoh and Takema Fukatsu},
  title = {Complete genomes of mutualistic bacterial co-symbionts "Candidatus Sulcia muelleri" and "Candidatus Nasuia deltocephalinicola" of the rice green leafhopper Nephotettix cincticeps},
  journal = {Microbiol Resour Announs},
  year = 2023,
}

@article{CTT100908285,
  author = {Kohei Nagao and Yoshiki Tanaka and Rei Kajitani and Atsushi Toyoda and Takehiko Itoh and Souichirou Kubota and Yuji Goto},
  title = {Bioinformatic and fine-scale chromosomal mapping reveal the nature and evolution of eliminated chromosomes in the Japanese hagfish, Eptatretus burgeri, through analysis of repetitive DNA families},
  journal = {PLoS One},
  year = 2023,
}

@article{CTT100899188,
  author = {Takahiro Yamabe and Rei Kajitani and Atsushi Toyoda and Takehiko Itoh},
  title = {Chromosomal-level genome assembly of the coffee bee hawk moth reveals the evolution of chromosomes and the molecular basis of distinct phenotypes},
  journal = {Genome Biology and Evolution},
  year = 2023,
}

@article{CTT100899184,
  author = {Hiroyuki Tanaka and Tatsuki Hori and Shohei Yamamoto and Atsushi Toyoda and Kentaro Yano and Kyoko Yamane and Takehiko Itoh},
  title = {Haplotype-resolved chromosomallevel assembly of wasabi (Eutrema japonicum) genome},
  journal = {Scientific Data},
  year = 2023,
}

@article{CTT100880733,
  author = {Mizuki Horoiwa and Takashi Nakamura and Hideaki Yuasa and Rei Kajitani and Yosuke Ameda and Tetsuro Sasaki and Hiroki Taninaka and Taisei Kikuchi and Takehisa  Yamakita and Toyoda Atsushi and Takehiko Itoh and Nina Yasuda},
  title = {Integrated Population Genomic Analysis and Numerical Simulation to Estimate Larval Dispersal of Acanthaster cf. solaris Between Ogasawara and Other Japanese Regions},
  journal = {Frontiers in Marine Science},
  year = 2022,
}

@article{CTT100863097,
  author = {Michiharu Nakano and Hideki Hirakawa and Eigo Fukai and Atsushi Toyoda and Rei Kajitani and Yohei Minakuchi and Takehiko Itoh and Yohei Higuchi and Toshiaki Kozuka and Hidemasa Bono and Kenta Shirasawa and Ippei Shiraiwa and Katsuhiko Sumitomo and Tamotsu Hisamatsu and Michio Shibata and Sachiko Isobe and Kenji Taniguchi and Makoto Kusaba},
  title = {A chromosome-level genome sequence of Chrysanthemum seticuspe, a model species for hexaploid cultivated chrysanthemum},
  journal = {Communications Biology},
  year = 2021,
}

@article{CTT100863094,
  author = {Rei Kajitani and Hideki Noguchi and Yasuhiro Gotoh and Yoshitoshi Ogura and Dai Yoshimura and Miki Okuno and Atsushi Toyoda and Tomomi Kuwahara and Tetsuya Hayashi and Takehiko Itoh},
  title = {MetaPlatanus: a metagenome assembler that combines long-range sequence links and species-specific features},
  journal = {Nucleic Acids Research},
  year = 2021,
}

@article{CTT100863086,
  author = {Hideaki Yuasa and Rei Kajitani and Yuta Nakamura and Kazuki Takahashi and Miki Okuno and Fumiya Kobayashi and Takahiro Shinoda and Atsushi Toyoda and Yutaka Suzuki and Nalinee Thongtham and Zac Forsman and Omri Bronstein and Davide Seveso and Enrico Montalbetti and Coralie Taquet and Gal Eyal and Nina Yasuda and Takehiko Itoh},
  title = {Elucidation of the speciation history of three sister species of crown-of-thorns starfish (Acanthaster spp.) based on genomic analysis},
  journal = {DNA Research},
  year = 2021,
}

@article{CTT100851956,
  author = {Nakamura, H. and Aibara, M. and Kajitani, R. and Mrosso, HDJ and Mzighani,  SI and Toyoda, A. and Itoh, T. and Okada, N. and Nikaido, M},
  title = {Genomic Signatures for Species-Specific Adaptation in Lake Victoria Cichlids Derived from Large-Scale Standing Genetic Variation},
  journal = {Molecular Biology and Evolution},
  year = 2021,
}

@article{CTT100852227,
  author = {Koji Inoue and Yuki Yoshioka and Hiroyuki Tanaka and Azusa Kinjo and Mieko Sassa and Ikuo Ueda and Chuya Shinzato and Atsushi Toyoda and Takehiko Itoh},
  title = {Genomics and Transcriptomics of the green mussel explain the durability of its byssus},
  journal = {Scientific Reports},
  year = 2021,
}

@article{CTT100846439,
  author = {Kyoko Ishino and Hidetoshi Hasuwa and Jun Yoshimura and Yuka W Iwasaki and Hidenori Nishihara and Naomi M Seki and Takamasa Hirano and Marie Tsuchiya and Hinako Ishizaki and Harumi Masuda and Tae Kuramoto and Kuniaki Saito and Yasubumi Sakakibara and Atsushi Toyoda and Takehiko Itoh and Mikiko C Siomi and Shinichi Morishita and Haruhiko Siomi},
  title = {Hamster PIWI proteins bind to piRNAs with stage-specific size variations during oocyte maturation},
  journal = {Nucleic Acids Research},
  year = 2021,
}

@article{CTT100852234,
  author = {Shin-ichi Arimura and Hiroki Ayabe and Hajime Sugaya and Miki Okuno and Yoshiko Tamura and Yu Tsuruta and Yuta Watari and Shungo Yanase and Takaki Yamauchi and Takehiko Itoh and Atsushi Toyoda and Hideki Takanashi and Nobuhiro Tsutsumi},
  title = {Targeted gene disruption of ATP synthases 6-1 and 6-2 in the mitochondrial genome of Arabidopsis thaliana by mitoTALENs},
  journal = {The Plant Journal},
  year = 2020,
}

@article{CTT100837207,
  author = {Nikaido, M. and Kondo, S. and Zicong Zhang and Wu, J. and Nishihara, H. and Niimura, Y. and Suzuki, S. and Touhara K. and Suzuki, Y. and Noguchi, H. and Minakuchi, Y. and Toyoda, A. and Fujiyama, A. and Sugano, S. and Yoneda, M. and Kai, C.},
  title = {Comparative genomic analyses illuminate the distinct evolution of megabats within Chiroptera},
  journal = {DNA Research},
  year = 2020,
}

@article{CTT100852239,
  author = {Naohisa Wada and Hideaki Yuasa and Rei Kajitani and Yasuhiro Gotoh and Yoshitoshi Ogura and Dai Yoshimura and Atsushi Toyoda and Sen-Lin Tang and Yukihiro Higashimura and Hugh Sweatman and Zac Forsman and Omri Bronstein and Gal Eyal and Nalinee Thongtham and Takehiko Itoh and Tetsuya Hayashi and Nina Yasuda},
  title = {A ubiquitous subcuticular bacterial symbiont of a coral predator, the crown-of thorns starfish, in the Indo-Pacifc},
  journal = {Microbiome},
  year = 2020,
}

@article{CTT100852247,
  author = {Kai Wang and Ryo Tomura and Wei Chen and Miho Kiyooka and Hinako Ishizaki and Tomoyuki Aizu and Yohei Minakuchi and Masahide Seki and Yutaka Suzuki and Tatsuya Omotezako and Ritsuko Suyama and Aki Masunaga and Charles Plessy and Nicholas M. Luscombe and Christelle Dantec and Patrick Lemaire and Takehiko Itoh and Atsushi Toyoda and Hiroki Nishida and Takeshi A. Onuma},
  title = {A genome database for a Japanese population of the larvacean Oikopleura dioica},
  journal = {Development Growth & Differentiation},
  year = 2020,
}

@article{CTT100832499,
  author = {Takeuchi M. and Kuwahara H. and Murakami T. and Takahashi K. and Kajitani R. and Toyoda A. and Itoh T. and Ohkuma M. and Hongoh Y},
  title = {Parallel reductive genome evolution in Desulfovibrio ectosymbionts independently acquired by Trichonympha protists in the termite gut},
  journal = {The ISME Journal},
  year = 2020,
}

@article{CTT100852414,
  author = {Keiji Nakamura and Kazunori Murase and Mitsuhiko P. Sato and Atsushi Toyoda and Takehiko Itoh and Jacques Georges Mainil and Denis Piérard and Shuji Yoshino and Keiko Kimata and Junko Isobe and Kazuko Seto and Yoshiki Etoh and Hiroshi Narimatsu and Shioko Saito and Jun Yatsuyanagi and Kenichi Lee and Sunao Iyoda and Makoto Ohnishi and Tadasuke Ooka and Yasuhiro Gotoh and Yoshitoshi Ogura and Tetsuya Hayashi},
  title = {Differential dynamics and impacts of prophages and plasmids on the pangenome and virulence factor repertoires of Shiga toxin-producing Escherichia coli O145:H28},
  journal = {Microbial Genomics},
  year = 2020,
}

@article{CTT100853275,
  author = {Tomohiko Kazama and Miki Okuno and Yuta Watari and Shungo Yanase and Chie Koizuka and Yu Tsuruta and Hajime Sugaya and Atsushi Toyoda and Takehiko Itoh and Nobuhiro Tsutsumi and Kinya Toriyama and Nobuya Koizuka and Shin-ichi Arimura},
  title = {Curing cytoplasmic male sterility via TALEN-mediated mitochondrial genome editing},
  journal = {Nature Plants},
  year = 2019,
}

@article{CTT100853293,
  author = {Rei Kajitani and Dai Yoshimura and Miki Okuno and Yohei Minakuchi and Hiroshi Kagoshima and Asao Fujiyama and Kaoru Kubokawa and Yuji Kohara and Atsushi Toyoda and Takehiko Itoh},
  title = {Platanus-allee is a de novo haplotype assembler enabling a comprehensive access to divergent heterozygous regions},
  journal = {Nature Communications},
  year = 2019,
}

@article{CTT100786570,
  author = {Yoshitoshi Ogura and Kazuko Seto and Yo Morimoto and Keiji Nakamura and Mitsuhiko P. Sato and Yasuhiro Gotoh and Takehiko Itoh and Atsushi Toyoda and Makoto Ohnishi and Tetsuya Hayashi},
  title = {Genomic Characterization of β-Glucuronidase-Positive Escherichia coli O157:H7 Producing Stx2a},
  journal = {Emerging infectious diseases},
  year = 2018,
}

@article{CTT100786558,
  author = {Toshiya Ando and Takeshi Matsuda and Kumiko Goto and Kimiko Hara and Akinori Ito and Junya Hirata and Joichiro Yatomi and Rei Kajitani and Miki Okuno and Katsushi Yamaguchi and Masaaki Kobayashi and Tomoyuki Takano and Yohei Minakuchi and Masahide Seki and Yutaka Suzuki and Kentaro Yano and Takehiko Itoh and Shuji Shigenobu and Atsushi Toyoda and Teruyuki Niimi},
  title = {Repeated inversions within a pannier intron drive diversification of intraspecific colour patterns of ladybird beetles},
  journal = {Nature communications},
  year = 2018,
}

@article{CTT100747027,
  author = {Ajeng Pramono and Hirokazu Kuwahara and Takehiko Itoh and Toyoda Atsushi and Akinori Yamada and Hongoh Y},
  title = {Discovery and complete genome sequence of a bacteriophage from an obligate intracellular symbiont of a cellulolytic protist in the termite gut},
  journal = {Microbes and environments},
  year = 2017,
}

@article{CTT100747025,
  author = {Masahito Hayatsu and Kanako Tago and Ikuo Uchiyama and Atsushi Toyoda and Yong Wang and Yumi Shimomura and Takashi Okubo and Futoshi Kurisu and Yuhei Hirono and Kunihiko Nonaka and Hiroko Akiyama and Takehiko Itoh and Hideto Takami},
  title = {An acid-tolerant ammonia-oxidizing gamma-proteobacterium from soil},
  journal = {Isme Journal},
  year = 2017,
}

@article{CTT100747026,
  author = {Hideto Takami and Atsushi Toyoda and Ikuo Uchiyama and Takehiko Itoh and Yoshihiro Takaki and Wataru Arai and Shinro Nishi and Mikihiko Kawai and Kazuo Shin-ya and Haruo Ikeda},
  title = {Complete genome sequence and expression profile of the commercial lytic enzyme producer Lysobacter enzymogenes M497-1},
  journal = {DNA Research},
  year = 2017,
}

@article{CTT100747028,
  author = {Arzuba Akter and Tadasuke Ooka and Yasuhiro Gotoh and Seigo Yamamoto and Hiromi Fujita and Fumio Terasoma and Kouji Kida and Masakatsu Taira and Fumiko Nakadouzono and Mutsuyo Gokuden and Manabu Hirano and Mamoru Miyashiro and Kouichi Inari and Yukie Shimazu and Kenji Tabara and Atsushi Toyoda and Dai Yoshimura and Takehiko Itoh and Tomokazu Kitano and Mitsuhiko P. Sato and Keisuke Katsura and Shakhinur Islam Mondal and Yoshitoshi Ogura and Shuji Ando and Tetsuya Hayashi},
  title = {Extremely Low Genomic Diversity of Rickettsia japonica Distributed in Japan},
  journal = {Genome Biology and Evolution},
  year = 2017,
}

@article{CTT100747031,
  author = {Atsushi Hoshino and Vasanthan Jayakumar and Eiji Nitasaka and Atsushi Toyoda and Hideki Noguchi and Takehiko Itoh and Tadasu Shin-I and Yohei Minakuchi and Yuki Koda and Atsushi J. Nagano and Masaki Yasugi and Mie N. Honjo and Hiroshi Kudoh and Motoaki Seki and Asako Kamiya and Toshiyuki Shiraki and Piero Carninci and Erika Asamizu and Hiroyo Nishide and Sachiko Tanaka and Kyeung-Il Park and Yasumasa Morita and Kohei Yokoyama and Ikuo Uchiyama and Yoshikazu Tanaka and Satoshi Tabata and Kazuo Shinozaki and Yoshihide Hayashizaki and Yuji Kohara and Yutaka Suzuki and Sumio Sugano and Asao Fujiyama and Shigeru Iida and Yasubumi Sakakibara},
  title = {Genome sequence and analysis of the Japanese morning glory Ipomoea nil},
  journal = {Nature Communications},
  year = 2016,
}

@article{CTT100745530,
  author = {Adam M. Session and Yoshinobu Uno and Taejoon Kwon and Jarrod Chapman and Atsushi Toyoda and Shuji Takahashi and Akimasa Fukui and Akira Hikosaka and Atsushi Suzuki and Mariko Kondo and Simon van Heeringen and Ian Quigley and Sven Heinz and Hajime Ogino and Haruki Ochi and Uffe Hellsten and Jessica B  Lyons and Oleg Simakov and Nicholas Putnam and Jonathan Stites and Yoko Kuroki and Toshiaki Tanaka and et al.},
  title = {Genome evolution in the allotetraploid frog Xenopus laevis.},
  journal = {Nature},
  year = 2016,
}

@article{CTT100747036,
  author = {Hideko Urushihara and Hidekazu Kuwayama and Kensuke Fukuhara and Takehiko Itoh and Hiroshi Kagoshima and Tadasu Shin-I and Atsushi Toyoda and Kazuyo Ohishi and Tateaki Taniguchi and Hideki Noguchi and Yoko Kuroki and Takashi Hata and Kyoko Uchi and Kurato Mohri and Jason S King and Robert H Insall and Yuji Kohara and Asao Fujiyama},
  title = {Comparative genome and transcriptome analyses of the social amoeba Acytostelium subglobosum that accomplishes multicellular development without germ-soma differentiation},
  journal = {Bmc Genomics},
  year = 2015,
}

@article{CTT100747040,
  author = {Rei Kajitani and Kouta Toshimoto and Hideki Noguchi and Atsushi Toyoda and Yoshitoshi Ogura and Miki Okuno and Mitsuru Yabana and Masayuki Harada and Eiji Nagayasu and Haruhiko Maruyama and Yuji Kohara and Asao Fujiyama and Tetsuya Hayashi and Takehiko Itoh},
  title = {Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads},
  journal = {Genome Research},
  year = 2014,
}

@article{CTT100747041,
  author = {Mikihiko Kawai and Taiki Futagami and Atsushi Toyoda and Yoshihiro Takaki and Shinro Nishi and Sayaka Hori and Wataru Arai and Taishi Tsubouchi and Yuki Morono and Ikuo Uchiyama and Takehiko Itoh and Asao Fujiyama and Fumio Inagaki and Hideto Takami},
  title = {High frequency of phylogenetically diverse reductive dehalogenase-homologous genes in deep subseafloor sedimentary metagenomes},
  journal = {Frontiers in Microbiology},
  year = 2014,
}

@article{CTT100810841,
  author = {Masato Nikaido and Hideki Noguchi and Atsushi Toyoda and Yutaka Suzuki and Rei Kajitani and Hikoyuu Suzuki and Miki Okuno and Mitsuto Aibara and Benjamin P. Ngatunga and Semvua Mzighani and Hassan W.J. Kalombo and Kawilarang W.A. Masengi and Josef Tuda and Sadao Nogami and Ryuichiro Maeda and Masamitsu Iwata and Yoshitaka Abe and KOJI FUJIMURA and Masataka Okabe and Takanori Amano and Akiteru Maeno and Toshihiko Shiroishi and Sumio Sugano and Yuji Kohara and Asao Fujiyama and NORIHIRO OKADA},
  title = {Coelacanth genomes reveal signatures for evolutionary transition from water to land},
  journal = {Genome Research},
  year = 2013,
}

@article{CTT100747048,
  author = {Hideto Takami and Hideki Noguchi and Yoshihiro Takaki and Ikuo Uchiyama and Atsushi Toyoda and Shinro Nishi and Gab-Joo Chee and Wataru Arai and Takuro Nunoura and Takehiko Itoh and Masahira Hattori and Ken Takai},
  title = {A Deeply Branching Thermophilic Bacterium with an Ancient Acetyl-CoA Pathway Dominates a Subsurface Ecosystem},
  journal = {Plos One},
  year = 2012,
}

@article{CTT100576725,
  author = {Yuichi Hongoh and Vineet K. Sharma and Tulika Prakash and Satoko Noda and Hidehiro Toh and Todd D. Taylor and Toshiaki Kudo and Yoshiyuki Sakaki and Toyoda Atsushi and Masahira Hattori and Moriya Ohkuma},
  title = {Genome of an endosymbiont coupling N2 fixation to cellulolysis within protist cells in termite gut},
  journal = {Science},
  year = 2008,
}

@article{CTT100576743,
  author = {Yuichi Hongoh and Vineet K. Sharma and Tulika Prakash and Satoko Noda and Todd D. Taylor and Toshiaki Kudo and yoshiyuki sakaki and Toyoda Atsushi and Masahira Hattori and Moriya Ohkuma},
  title = {Complete genome of the uncultured Termite Group 1 bacteria in a single host protist cell},
  journal = {Proceedings of the National Academy of Sciences of the United States of America},
  year = 2008,
}

@inproceedings{CTT100891443,
  author = {Hiroyuki Tanaka and Tatsuki Hori and 山本祥平 and Toyoda Atsushi and 矢野健太郎 and 山根京子 and Takehiko Itoh},
  title = {ワサビゲノム解読の現状},
  booktitle = {},
  year = 2023,
}

@inproceedings{CTT100891445,
  author = {Takahiro Yamabe and Rei Kajitani and Atsushi Toyoda and Takehiko Itoh},
  title = {Chromosome-Level De Novo Genome Assembly and Comparative Genome Analysis of the Coffee Bee Hawk Moth, Cephonodes Hylas},
  booktitle = {},
  year = 2023,
}

@inproceedings{CTT100891441,
  author = {Kentaro Matsuoka and Yuta Mochimaru and Miki Okuno and 清岡美穂 and 石崎比奈子 and Toyoda Atsushi and 黒岩麻里 and Takehiko Itoh},
  title = {トクノシマトゲネズミの新規ゲノム構築とX染色体上祖先Y領域の比較解析},
  booktitle = {},
  year = 2022,
}

@inproceedings{CTT100891440,
  author = {Yuta Mochimaru and Kentaro Matsuoka and Miki Okuno and 清岡美穂 and 石崎比奈子 and Toyoda Atsushi and 黒岩麻里 and Takehiko Itoh},
  title = {オキナワトゲネズミの新規ゲノム配列決定とneo性染色体のゲノム解析},
  booktitle = {},
  year = 2022,
}

@inproceedings{CTT100874845,
  author = {Yo Yamasaki and Tomoyuki Kokita and Koki Kato and Asato Irifune and Mitsuki Kuroda and Hiroshi Takahashi and Yoshiyasu Machida and Asano Ishikawa and Mikiko Tanaka and Seiichi Mori and Atsushi Toyoda and Jun Kitano},
  title = {Determinism and contingency in the molecular genetic basis of parallel armor plate evolution during stickleback radiation},
  booktitle = {},
  year = 2022,
}

@inproceedings{CTT100888079,
  author = {Ryo Hatashima and Toyoda Atsushi and Rei Kajitani and Takehiko Itoh and Masato Nikaido},
  title = {免疫関連遺伝子の発現消失がもたらしたシクリッドの唇肥大化平行進化},
  booktitle = {},
  year = 2022,
}

@inproceedings{CTT100875312,
  author = {Ryo Hatashima and Nagatoshi Machii and Toyoda Atsushi and Rei Kajitani and Tatsuki Nagasawa and Takehiko Itoh and Masato Nikaido},
  title = {免疫システムがもたらしたシクリッドの唇肥大化平行進化},
  booktitle = {},
  year = 2022,
}

@inproceedings{CTT100891438,
  author = {Takahiro Yamabe and Rei Kajitani and Toyoda Atsushi and Takehiko Itoh},
  title = {スズメガ科昆虫オオスカシバの新規ゲノムアセンブリと比較ゲノム解析},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100865873,
  author = {Ryo Hatashima and Toyoda Atsushi and Rei Kajitani and Takehiko Itoh and Masato Nikaido},
  title = {東アフリカ産シクリッドで見られる唇肥大化平行進化の分子メカニズム},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100865880,
  author = {Hatashima, R. and Toyoda, A. and Kajitani and Takehiko Itoh and Nikaido, M.},
  title = {A key factor for parallel evolution of hypertrophied lips in East African cichlid fishes},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100837212,
  author = {Haruna Nakamura and Ryo Hatashima and Mitsuto Aibara and Toyoda Atsushi and Takehiko Itoh and Masato Nikaido},
  title = {Whole genome sequencing analyses of Lake Victoria cichlid, Haplochromis chilotes, demonstrate genomic signatures of local adaptation to subpopulations},
  booktitle = {},
  year = 2020,
}

@inproceedings{CTT100837208,
  author = {Ryo Hatashima and Toyoda Atsushi and Rei Kajitani and Takehiko Itoh and Masato Nikaido},
  title = {シクリッドにおける唇肥大化の平行進化メカニズム},
  booktitle = {},
  year = 2020,
}

@inproceedings{CTT100837209,
  author = {Ryo Hatashima and Toyoda Atsushi and Rei Kajitani and Takehiko Itoh and Masato Nikaido},
  title = {A mechanism for parallel evolution on lip thickness of cichlid fishes},
  booktitle = {},
  year = 2020,
}

@inproceedings{CTT100837210,
  author = {Ryo Hatashima and Toyoda Atsushi and Rei Kajitani and Takehiko Itoh and Masato Nikaido},
  title = {シクリッドにおける唇肥大化の平行進化メカニズム解明},
  booktitle = {},
  year = 2020,
}

@inproceedings{CTT100837213,
  author = {Haruna Nakamura and Mitsuto Aibara and Toyoda Atsushi and Takehiko Itoh and Masato Nikaido},
  title = {全ゲノム解析によるヴィクトリア湖産シクリッドにおける種特有の適応パターンの解明},
  booktitle = {},
  year = 2020,
}

@inproceedings{CTT100851549,
  author = {Shun Oouchi and Rei Kajitani and Toyoda Atsushi and Takehiko Itoh},
  title = {Hi-C法による染色体レベルのscaffolding，ハプロタイプ構築手法の開発と高ヘテロ接合性サンプル（イトマキヒトデ）への応用},
  booktitle = {},
  year = 2020,
}

@inproceedings{CTT100851545,
  author = {Rei Kajitani and Miki Okuno and Hiroyuki Tanaka and Atsushi Toyoda and Takehiko Itoh},
  title = {Platanus-allee is a de novo haplotype assembler designed for organisms with highly divergent haplotypes: an update},
  booktitle = {},
  year = 2020,
}

@inproceedings{CTT100810868,
  author = {Ryo Hatashima and Kenta Suzuki and Toyoda Atsushi and Rei Kajitani and Takehiko Itoh and Masato Nikaido},
  title = {シクリッドの唇肥大化における平行進化の遺伝的メカニズム解明},
  booktitle = {},
  year = 2019,
}

@inproceedings{CTT100810865,
  author = {Takuto Higuchi and Hidenori Nishihara and Rei Kajitani and Toyoda Atsushi and Takehiko Itoh and NORIHIRO OKADA and Masato Nikaido},
  title = {東アフリカ産淡水魚シクリッドゲノムにおける祖先多型遺伝子座の起源},
  booktitle = {},
  year = 2019,
}

@inproceedings{CTT100810871,
  author = {Haruna Nakamura and Ryo Hatashima and Toyoda Atsushi and Takehiko Itoh and Masato Nikaido},
  title = {全ゲノム比較が明らかにしたヴィクトリア湖産シクリッド3種の適応プロセス},
  booktitle = {},
  year = 2019,
}

@inproceedings{CTT100810872,
  author = {Takuto Higuchi and Hidenori Nishihara and Rei Kajitani and Toyoda Atsushi and Takehiko Itoh and NORIHIRO OKADA and Masato Nikaido},
  title = {ゲノムワイドなSINE 挿入解析から東アフリカ産シクリッドにおける祖先多型の持続性を解明する},
  booktitle = {},
  year = 2019,
}

@inproceedings{CTT100780823,
  author = {Yuiti Nagura and Hirokazu Kuwahara and Mami Harada and Toyoda Atsushi and Moriya Ohkuma and Yuichi Hongoh},
  title = {シロアリ腸内原生生物の核内に共生する未培養Verrucomicrobia門細菌の多様性とゲノム解析},
  booktitle = {},
  year = 2018,
}

@inproceedings{CTT100767806,
  author = {Yoshiki Tanaka and Rei Kajitani and Toyoda Atsushi and Yuji Goto and Souichirou Kubota and Takehiko Itoh},
  title = {ショートリードを用いたリピート配列のde novo検出法の開発},
  booktitle = {},
  year = 2017,
}

@inproceedings{CTT100780798,
  author = {Ajeng Pramono and Hirokazu Kuwahara and Takehiko Itoh and Toyoda Atsushi and Moriya Ohkuma and Akinori Yamada and Yuichi Hongoh},
  title = {Bacteriophage from an obligate intracellular symbiont of a cellulolytic protist in the termite gut, Prorhinotermes japonicus (Isoptera: family Rhinotermitidae)},
  booktitle = {},
  year = 2017,
}

@inproceedings{CTT100724441,
  author = {高橋秀治 and Toyoda Atsushi and 宇野好宣 and Yoko Kuroki and 彦坂暁 and 原本悦和 and Toshiaki Tanaka and 西城智仁 and 野口英樹 and 松田洋一 and 近藤真理子 and 藤山秋佐夫 and 上野直人 and 平良眞規 and 浅島誠},
  title = {Xenopus laevis全ゲノム解析：アフリカツメガエルnodal5 と nodal6遺伝子クラスターについての解析},
  booktitle = {},
  year = 2015,
}

@inproceedings{CTT100690996,
  author = {Taejoon Kwon and Shuji Takahashi and Toshiaki Tanaka and Hideki Noguchi and Atsushi Toyoda and Asao Fujiyama and Yutaka Suzuki and Naoto Ueno and Masanori Taira and John B. Wallingford and Edward M. Marcotte},
  title = {What we can do with over 300 billion bases of RNA-seq data: The case of Xenopus laevis genome project},
  booktitle = {},
  year = 2013,
}

@misc{CTT100745531,
  author = {Adam M. Session and Yoshinobu Uno and Taejoon Kwon and Jarrod Chapman and Atsushi Toyoda and Shuji Takahashi and Akimasa Fukui and Akira Hikosaka and Atsushi Suzuki and Mariko Kondo and Simon van Heeringen and Ian Quigley and Sven Heinz and Hajime Ogino and Haruki Ochi and Uffe Hellsten and Jessica B  Lyons and Oleg Simakov and Nicholas Putnam and Jonathan Stites and Yoko Kuroki and Toshiaki Tanaka and et al.},
  title = {アフリカツメガエルの複雑なゲノムを解読―脊椎動物への進化の原動力「全ゲノム重複」の謎に迫る―},
  year = 2016,
}

@misc{CTT100745532,
  author = {Adam M. Session and Yoshinobu Uno and Taejoon Kwon and Jarrod Chapman and Atsushi Toyoda and Shuji Takahashi and Akimasa Fukui and Akira Hikosaka and Atsushi Suzuki and Mariko Kondo and Simon van Heeringen and Ian Quigley and Sven Heinz and Hajime Ogino and Haruki Ochi and Uffe Hellsten and Jessica B  Lyons and Oleg Simakov and Nicholas Putnam and Jonathan Stites and Yoko Kuroki and Toshiaki Tanaka and et al.},
  title = {アフリカツメガエルの複雑なゲノムを解読：脊椎動物への進化の原動力「全ゲノム重複」の謎に迫る},
  year = 2016,
}