@article{CTT100930024, author = {Yuki Hishikawa and Taiga Suzuki and Basudev Maity and Hiroki Noya and Michito Yoshizawa and Asuka Asanuma and Yuri Katagiri and Satoshi Abe and Satoru Nagatoishi and Kouhei Tsumoto and Takafumi Ueno}, title = {Design of Aromatic Interaction Networks in a Protein Cage Modulated by Fluorescent Ligand Binding}, journal = {ADVANCED SCIENCE}, year = 2025, } @article{CTT100930019, author = {Basudev Maity and Mitsuo Shoji and Fangjia Luo and Takanori Nakane and Satoshi Abe and Shigeki Owada and Jungmin Kang and Kensuke Tono and Rie Tanaka and Thuc Toan Pham and Mariko Kojima and Yuki Hishikawa and Junko Tanaka and Jiaxin Tian and Misaki Nagama and Taiga Suzuki and Hiroki Noya and Yuto Nakasuji and Asuka Asanuma and Xinchen Yao and So Iwata and Yasuteru Shigeta and Eriko Nango Takafumi Ueno}, title = {Real-time observation of a metal complex-driven reaction intermediate using a porous protein crystal and serial femtosecond crystallography}, journal = {Nature Communications}, year = 2024, } @article{CTT100916913, author = {Yuki Hishikawa and Hiroki Noya and Satoru Nagatoishi and Takashi Yoshidome and Basudev Maity and Kouhei Tsumoto and Satoshi Abe and Takafumi Ueno}, title = {Elucidating Conformational Dynamics and Thermostability of Designed Aromatic Clusters by Using Protein Cages}, journal = {Chemistry A Europian Journal}, year = 2023, } @article{CTT100885818, author = {Mariko Kojima and Satoshi Abe and Tadaomi Furuta and Duy Phuoc Tran and Kunio Hirata and Keitaro Yamashita and Yuki Hishikawa and Akio Kitao and Takafumi Ueno}, title = {Engineering of an in-cell protein crystal for fastening a metastable conformation of a target miniprotein}, journal = {Biomater. Sci.}, year = 2023, } @article{CTT100867586, author = {Zhipeng Li and Basudev Maity and Yuki Hishikawa and Takafumi Ueno and Diannan Lu}, title = {The Importance of Subunit-subunit Interface on Ferritin Disassembly: A Molecular Dynamics Study}, journal = {Langmuir}, year = 2022, } @article{CTT100822754, author = {Yuki Hishikawa and Basudev Maity and Nozomi Ito and Satoshi Abe and Diannan Lu and Takafumi Ueno.}, title = {Design of Multinuclear Gold Binding Site at the Two-fold Symmetric Interface of the Ferritin Cage.}, journal = {Chemistry Letters}, year = 2020, } @article{CTT100811610, author = {Basudev Maity and Yuki Hishikawa and Diannan Lu and Takafumi Ueno}, title = {Recent progresses in the accumulation of metal ions into the apo-ferritin cage: Experimental and theoretical perspectives}, journal = {Polyhedron}, year = 2019, } @article{CTT100786219, author = {Takeya sho and Basudev Maity and Kenta Fujita and Megumi Mano and Yuki Hishikawa and Takafumi Ueno}, title = {Photo-induced In Vivo MRI Imaging with Rapid CO Release from an MnCO-Protein Needle Composite}, journal = {Chemistry A Europian Journal}, year = 2018, } @inproceedings{CTT100915925, author = {鈴木大凱 and 菱川湧輝 and 西山弓恵 and 茂田井和紀 and 早水裕平 and 上野隆史}, title = {フラーレン内包タンパク質ケージの構造と物性}, booktitle = {高分子学会予稿集}, year = 2024, } @inproceedings{CTT100916903, author = {浅沼明日香 and 菱川湧輝 and 野谷大樹 and Basudev Maity and 上野隆史}, title = {タンパク質ケージへのトリプトファン集積場形成と外来分子内包}, booktitle = {}, year = 2023, } @inproceedings{CTT100912073, author = {鈴木大凱 and 菱川湧輝 and 上野隆史}, title = {フラーレン内包タンパク質ケージの設計と構造解析}, booktitle = {バイオ・高分子シンポジウム講演要旨集}, year = 2023, } @inproceedings{CTT100888551, author = {浅沼 明日香 and 菱川 湧輝 and 野谷 大樹 and 上野 隆史}, title = {フェリチンを用いたトリプトファン集積構造の構築}, booktitle = {}, year = 2022, } @inproceedings{CTT100867453, author = {Mariko Kojima and Yuki Hishikawa and Satoshi Abe and Tadaomi Furuta and Duy Phuoc Tran and Akio Kitao and Takafumi Ueno}, title = {Dynamics structural analysis of miniprotein by in-cell crystal engineering}, booktitle = {}, year = 2022, } @inproceedings{CTT100867510, author = {Yuki Hishikawa and Asuka Asanuma and Basudev Maity and Satoru Nagatoishi and Kouhei Tsumoto and Satoshi Abe and Takafumi Ueno}, title = {Analysis of Dynamic Behavior of Aromatic Interactions using Protein Cages}, booktitle = {}, year = 2022, } @inproceedings{CTT100867497, author = {菱川湧輝 and MAITYBASUDEV and 吉沢道人 and 森本 正和 and 安部聡 and 上野隆史}, title = {タンパク質ケージ内芳香族クラスターによる蛍光分子特性制御}, booktitle = {}, year = 2021, } @inproceedings{CTT100867484, author = {菱川湧輝 and 野谷大樹 and MAITYBASUDEV and 長門石 曉 and 津本浩平 and 安部聡 and 上野隆史}, title = {タンパク質ケージ結晶を用いた芳香族クラスターの動的挙動解析}, booktitle = {}, year = 2021, } @inproceedings{CTT100847106, author = {Mariko Kojima and Yuki Hishikawa and Satoshi Abe and Tadaomi Furuta and Duy Phuoc Tran and Akio Kitao and Takafumi Ueno}, title = {Energy Analysis of Miniprotein by in Vivo Protein Crystallization}, booktitle = {}, year = 2021, } @inproceedings{CTT100847585, author = {菱川湧輝 and 野谷大樹 and Basudev Maity and 安部聡 and 上野隆史}, title = {タンパク質ケージ内における芳香族分子集積と反応制御}, booktitle = {}, year = 2021, } @inproceedings{CTT100847589, author = {菱川湧輝 and 野谷大樹 and Basudev Maity and 安部聡 and 上野隆史}, title = {タンパク質ケージを利⽤した芳香族クラスターの構築と外来分子内包}, booktitle = {}, year = 2021, } @inproceedings{CTT100847586, author = {菱川湧輝 and 野谷大樹 and Basudev Maity and 安部聡 and 上野隆史}, title = {タンパク質ケージの内部空間設計による芳香族クラスターの構築}, booktitle = {}, year = 2020, } @inproceedings{CTT100847587, author = {菱川湧輝 and Basudev Maity and 安部聡 and Diannan Lu and 上野隆史}, title = {フェリチンケージのサブユニット界面を利用した多核金結合サイトの構築}, booktitle = {}, year = 2020, } @inproceedings{CTT100822755, author = {菱川湧輝 and Basudev Maity and 安部聡 and Diannan Lu and 上野隆史}, title = {かご状タンパク質フェリチンのサブユニット界面における金集積機構の解明}, booktitle = {}, year = 2020, } @inproceedings{CTT100823511, author = {Yuki Hishikawa and Takafumi Ueno and Diannan Lu}, title = {Molecular dynamics simulation of gold clusters at 2-fold interface in designed ferritin cage}, booktitle = {}, year = 2019, } @inproceedings{CTT100786223, author = {菱川 湧輝 and 安部 聡 and 上野 隆史}, title = {機能性分子融合タンパク質針の動的性質}, booktitle = {}, year = 2018, } @inproceedings{CTT100786220, author = {菱川 湧輝 and 安部 聡 and  上野 隆史}, title = {人工タンパク質針の長さ制御による機能創成}, booktitle = {}, year = 2018, } @inproceedings{CTT100786286, author = {Dan Que Nguyen and Yuki Hishikawa and Sam-Yong Park and Takafumi Ueno}, title = {Molecular Engineering Design of Protein Needle - External Protein Complexes}, booktitle = {}, year = 2018, } @inproceedings{CTT100786225, author = {菱川 湧輝 and 中川 元斗 and 平井 信充}, title = {三重県田中川干潟のヘドロを用いた微生物燃料電池の性能評価 ~負極電位・硫酸塩還元菌量・硫化物イオン量の関係~}, booktitle = {}, year = 2016, } @inproceedings{CTT100786229, author = {菱川 湧輝 and 中川 元斗 and 平井 信充}, title = {微生物燃料電池の負極電位に及ぼす微生物および土壌含有成分の影響}, booktitle = {}, year = 2016, } @inproceedings{CTT100786226, author = {菱川 湧輝}, title = {堆積物型微生物燃料電池の負極電位に及ぼす硫酸塩還元菌の影響}, booktitle = {}, year = 2015, } @inproceedings{CTT100786227, author = {中川 元斗 and 菱川 湧輝 and 平井 信充}, title = {ヘドロ電池の性能に及ぼす微生物および土壌含有成分の影響}, booktitle = {}, year = 2015, } @inproceedings{CTT100786224, author = {Gento Nakagawa and Yuki Hishikawa and Nobumitsu Hirai}, title = {Sensor for tidal soil using the electrochemical reaction of sediment microbial fuel cell}, booktitle = {}, year = 2015, } @inproceedings{CTT100786230, author = {菱川 湧輝 and 平井 信充}, title = {微生物燃料電池の性能に及ぼす電極材料、微生物、および土壌含有成分の影響}, booktitle = {}, year = 2015, } @inproceedings{CTT100786228, author = {菱川 湧輝 and 中川 元斗 and 平井 信充}, title = {鉄鋼材料を電極に用いた微生物燃料電池の特性評価}, booktitle = {}, year = 2015, } @inproceedings{CTT100786231, author = {菱川 湧輝 and 平井 信充}, title = {堆積物型微生物燃料電池のしくみを利用した干潟の土壌センサー}, booktitle = {}, year = 2015, } @inproceedings{CTT100786232, author = {菱川 湧輝 and 倉田 悠里 and 小早川 紗良 and 平井 信充 and 甲斐 穂高 and 山口 雅裕}, title = {三重県沿岸海域のCOD解析とプランクトンの同定}, booktitle = {}, year = 2014, } @misc{CTT100885760, author = {菱川湧輝}, title = {タンパク質ケージを用いた非共有結合性相互作用ネットワークの設計と動的挙動解明}, year = 2023, } @misc{CTT100910917, author = {菱川湧輝}, title = {タンパク質ケージを用いた非共有結合性相互作用ネットワークの設計と動的挙動解明}, year = 2023, } @misc{CTT100885759, author = {菱川湧輝}, title = {タンパク質ケージを用いた非共有結合性相互作用ネットワークの設計と動的挙動解明}, year = 2023, } @misc{CTT100885756, author = {菱川湧輝}, title = {タンパク質ケージを用いた非共有結合性相互作用ネットワークの設計と動的挙動解明}, year = 2023, } @phdthesis{CTT100885760, author = {菱川湧輝}, title = {タンパク質ケージを用いた非共有結合性相互作用ネットワークの設計と動的挙動解明}, school = {東京工業大学}, year = 2023, } @phdthesis{CTT100910917, author = {菱川湧輝}, title = {タンパク質ケージを用いた非共有結合性相互作用ネットワークの設計と動的挙動解明}, school = {東京工業大学}, year = 2023, } @phdthesis{CTT100885759, author = {菱川湧輝}, title = {タンパク質ケージを用いた非共有結合性相互作用ネットワークの設計と動的挙動解明}, school = {東京工業大学}, year = 2023, } @phdthesis{CTT100885756, author = {菱川湧輝}, title = {タンパク質ケージを用いた非共有結合性相互作用ネットワークの設計と動的挙動解明}, school = {東京工業大学}, year = 2023, }