@article{CTT100877321, author = {Matsumura Y and Ito R and Yajima A and Yamaguchi R and Tanaka T and Kawamura T and Magoori K and Abe Y and Uchida A and Yoneshiro T and Hirakawa H and Zhang J and Arai M and Yang C and Yang G and Takahashi H and Fujihashi H and Nakaki R and Yamamoto S and Ota S and Tsutsumi S and Inoue SI and Hiroshi Kimura and Wada Y and Kodama T and Inagaki T and Osborne TF and Hiroyuki Aburatani and Node K and Sakai J}, title = {Spatiotemporal dynamics of SETD5-containing NCoR-HDAC3 complex determines enhancer activation for adipogenesis}, journal = {Nat Commun}, year = 2021, } @article{CTT100869295, author = {Uchino S and Ito Y and Sato Y and Handa T and Ohkawa Y and Tokunaga M and Kimura H}, title = {Live imaging of transcription sites using an elongating RNA polymerase II-specific probe.}, journal = {J Cell Biol}, year = 2021, } @article{CTT100877315, author = {Harada A and Kimura H and Ohkawa Y}, title = {Recent advances in single-cell epigenomics}, journal = {Curr Opin Struct Biol}, year = 2021, } @article{CTT100877317, author = {Hayashi-Takanaka Y and Hayashi Y and Hirano Y and Hiroshi Kimura}, title = {MCM hexamers is associated with di-/tri-methylation of histone H4K20 toward S phase entry}, journal = {Nucleic Acids Research}, year = 2021, } @article{CTT100877314, author = {Maehara K and Tomimatsu K and Harada A and Tanaka Kaori and Sato Shoko and Fukuoka M and Okada S and Handa T and Kurumizaka H and Saitoh N and Hiroshi Kimura and Ohkawa Y}, title = {Modeling population size independent tissue epigenomes by ChIL-seq with single thin sections}, journal = {Mol Syst Biol}, year = 2021, } @article{CTT100877308, author = {Kudo H and Matsuo M and Satoh S and Hata T and Hachisu R and Nakamura M and Yamamoto YY and Kimura H and Matsui M and Obokata J}, title = {Cryptic promoter activation occurs by at least two different mechanisms in the Arabidopsis genome}, journal = {Plant J}, year = 2021, } @article{CTT100876657, author = {Yuko Sato and Masaru Nakao and Hiroshi Kimura}, title = {Live-cell imaging probes to track chromatin modification dynamics}, journal = {Microscopy (Oxf)}, year = 2021, } @article{CTT100869124, author = {Yang Liu and Ning Zhao and Masato T. Kanemaki and Yotaro Yamamoto and Yoshifusa Sadamura and Yuma Ito and Makio Tokunaga and Timothy J. Stasevich and Hiroshi Kimura}, title = {Visualizing looping of two endogenous genomic loci using synthetic zinc-finger proteins with anti-FLAG and anti-HA frankenbodies in living cells}, journal = {Genes Cells.}, year = 2021, } @article{CTT100876674, author = {Yuko Sato and Hiroshi Kimura}, title = {Multiplexed Imaging of Posttranslational Modifications of Endogenous Proteins in Live Cells}, journal = {Methods in Molecular Biology}, year = 2021, } @article{CTT100877306, author = {Zhang J and Matsumura Y and Kano Y and Yoshida A and Kawamura T and Hirakawa H and Inagaki T and Tanaka Toshiya and Hiroshi Kimura and Yanagi S and Fukami K and Doi T and Osborne TF and Kodama T and Aburatani H and Sakai J}, title = {Ubiquitination-dependent and -independent repression of target genes by SETDB1 reveal a context-dependent role for its methyltransferase activity during adipogenesis}, journal = {Genes Cells}, year = 2021, } @article{CTT100853917, author = {Yuko Sato and Hiroshi Kimura}, title = {Dynamic Behavior of Inactive X Chromosome Territory During the Cell Cycle as Revealed by H3K27me3-Specific Intracellular Antibody}, journal = {Methods in Molecular Biology}, year = 2021, } @article{CTT100877287, author = {Muraoka Y and Nikaido A and Kowada R and Kimura H and Yamaguchi M and Yoshida H}, title = {Identification of Rpd3 as a novel epigenetic regulator of Drosophila FIG 4, a Charcot-Marie-Tooth disease-causing gene}, journal = {Neuroreport}, year = 2021, } @article{CTT100877307, author = {Forero-Quintero LS and Raymond W and Handa T and Saxton MN and Morisaki T and Kimura H and Bertrand E and Munsky B and Stasevich TJ}, title = {Live-cell imaging reveals the spatiotemporal organization of endogenous RNA polymerase II phosphorylation at a single gene}, journal = {Nat Commun}, year = 2021, } @article{CTT100876683, author = {Mio K. Shibuta and Takuya Sakamoto and Tamako Yamaoka and Mayu Yoshikawa and Shusuke Kasamatsu and Noriyoshi Yagi and Satoru Fujimoto and Takamasa Suzuki and Satoshi Uchino and Yuko Sato and Hiroshi Kimura and Sachihiro Matsunaga}, title = {A live imaging system to analyze spatiotemporal dynamics of RNA polymerase II modification in Arabidopsis thaliana}, journal = {Communications Biology}, year = 2021, } @article{CTT100877292, author = {Tachiwana H and Dacher M and Maehara K and Harada A and Seto Y and Katayama R and Ohkawa Y and Kimura H and Kurumizaka H and Saitoh N}, title = {Chromatin structure-dependent histone incorporation revealed by a genome-wide deposition assay.}, journal = {eLife}, year = 2021, } @article{CTT100856717, author = {Uchino S and Ito Y and Sato Y and Handa T and Yasuyuki Ohkawa and Tokunaga M and Kimura H}, title = {Visualizing transcription sites in living cells using a genetically encoded probe specific for the elongating form of RNA polymerase II}, journal = {bioRxiv}, year = 2021, } @article{CTT100847093, author = {Yuki Ohmuro-Matsuyama and Tetsuya Kitaguchi and Hiroshi Kimura and Hiroshi Ueda}, title = {Simple Fluorogenic Cellular Assay for Histone Deacetylase Inhibitors Based on Split-Yellow Fluorescent Protein and Intrabodies}, journal = {ACS Omega}, year = 2021, } @article{CTT100853914, author = {Lennart Hilbert and Yuko Sato and Ksenia Kuznetsova and Tommaso Bianucci and Hiroshi Kimura and Frank Jülicher and Alf Honigmann and Vasily Zaburdaev and Nadine L. Vastenhouw}, title = {Transcription organizes euchromatin via microphase separation}, journal = {Nature Communications}, year = 2021, } @article{CTT100853916, author = {Sjoerd J D Tjalsma and Mayako Hori and Yuko Sato and Aurelie Bousard and Akito Ohi and Ana Cláudia Raposo and Julia Roensch and Agnes Le Saux and Jumpei Nogami and Kazumitsu Maehara and Tomoya Kujirai and Tetsuya Handa and Sandra Bagés-Arnal and Yasuyuki Ohkawa and Hitoshi Kurumizaka and Simão Teixeira da Rocha and Jan J Żylicz and Hiroshi Kimura and Edith Heard}, title = {H4K20me1 and H3K27me3 are concurrently loaded onto the inactive X chromosome but dispensable for inducing gene silencing}, journal = {EMBO reports}, year = 2021, } @article{CTT100852391, author = {M. Hieda and T. Matsumoto and M. Isobe and S. Kurono and K. Yuka and S. Kametaka and J. Y. Wang and Y. H. Chi and K. Kameda and H. Kimura and N. Matsuura and S. Matsuura}, title = {The SUN2-nesprin-2 LINC complex and KIF20A function in the Golgi dispersal}, journal = {Sci Rep}, year = 2021, } @article{CTT100852402, author = {R. Sousa-Luテュs and G. Dujardin and I. Zukher and H. Kimura and C. Weldon and M. Carmo-Fonseca and N. J. Proudfoot and T. Nojima}, title = {POINT technology illuminates the processing of polymerase-associated intact nascent transcripts}, journal = {Mol Cell}, year = 2021, } @article{CTT100852397, author = {Keita Ishida and Kanta Naruse and Yuta Mizouchi and Yoshihiro Ogawa and Michio Matsushita and Takeshi Shimi and Hiroshi Kimura and Satoru Fujiyoshi}, title = {Variable immersion microscopy with a high numerical aperture}, journal = {Opt Lett}, year = 2021, } @article{CTT100852394, author = {C. H. Ho and Y. Takizawa and W. Kobayashi and Y. Arimura and H. Kimura and H. Kurumizaka}, title = {Structural basis of nucleosomal histone H4 lysine 20 methylation by SET8 methyltransferase}, journal = {Life Sci Alliance}, year = 2021, } @article{CTT100853915, author = {Yusuke Fujiwara and Yuki Yamanashi and Akiko Fujimura and Yuko Sato and Tomoya Kujirai and Hitoshi Kurumizaka and Hiroshi Kimura and Kenzo Yamatsugu and Shigehiro A. Kawashima and Motomu Kanai}, title = {Live-Cell Epigenome Manipulation by Synthetic Histone Acylation Catalyst System}, journal = {Proceedings of the National Academy of Sciences of the United States of America}, year = 2021, } @article{CTT100896020, author = {Tada, M. and Hayashi, A. and Asano, Y. and Kubiura-Ichimaru, M. and Ito, T. and Yoshii, M. and Kimura, H. and Matsuda, Y. and Oshimura, M. and Hiroshi Kimura}, title = {Evidence for divergence of DNA methylation maintenance and a conserved inhibitory mechanism from DNA demethylation in chickens and mammals}, journal = {Genes and Genomics}, year = 2021, } @article{CTT100896018, author = {Hilbert, L. and Sato, Y. and Kuznetsova, K. and Bianucci, T. and Kimura, H. and Jülicher, F. and Honigmann, A. and Zaburdaev, V. and Vastenhouw, N.L. and Hiroshi Kimura}, title = {Author Correction: Transcription organizes euchromatin via microphase separation (Nature Communications, (2021), 12, 1, (1360), 10.1038/s41467-021-21589-3)}, journal = {Nature Communications}, year = 2021, } @article{CTT100896019, author = {Ohhata, T. and Yamazawa, K. and Miura-Kamio, A. and Takahashi, S. and Sakai, S. and Tamura, Y. and Uchida, C. and Kitagawa, K. and Niida, H. and Hiratani, I. and Kobayashi, H. and Kimura, H. and Wutz, A. and Kitagawa, M. and Hiroshi Kimura}, title = {Dynamics of transcription-mediated conversion from euchromatin to facultative heterochromatin at the Xist promoter by Tsix}, journal = {Cell Reports}, year = 2021, } @inproceedings{CTT100869516, author = {Satoshi Uchino and Yuma Ito and Jessica Dai and Yuko Sato and Tetsuya Handa and Yasuyuki Ohkawa and Makio Tokunaga and Hiroshi Kimura}, title = {Visualizing transcription sites in living cells using a genetically encoded probe specific for the elongating form of RNA polymerase II}, booktitle = {}, year = 2021, } @inproceedings{CTT100869523, author = {Satoshi Uchino and Yuma Ito and Yuko Sato and Tetsuya Handa and 大川 恭行 and makio tokunaga and Hiroshi Kimura}, title = {リン酸化型RNAポリメラーゼII可視化プローブによる転写部位の生細胞観察}, booktitle = {}, year = 2021, } @inproceedings{CTT100878693, author = {Hiroki Ozawa and Azusa Kambe and Kohdai Hibi and Hiroshi Kimura and Nobuaki Shiraki and Shoen Kume}, title = {メチオニン除去培養によるエピジェネティック変化を伴うヒトiPS細胞分化促進}, booktitle = {}, year = 2021, } @inproceedings{CTT100876650, author = {Yuko Sato and Satoshi Uchino and Yuma Ito and 前原一満 and 大川恭行 and makio tokunaga and Hiroshi Kimura}, title = {Nuclear dynamics and transcription regulation of inactive X chromosome revealed by live-imaging probes}, booktitle = {}, year = 2021, } @inproceedings{CTT100855959, author = {Hiroshi Kimura}, title = {Gene regulation and chromatin dynamics in living cells}, booktitle = {}, year = 2021, } @inproceedings{CTT100855958, author = {Hiroshi Kimura}, title = {転写活性化に伴うヒストンアセチル化とクロマチンのダイナミクス}, booktitle = {}, year = 2021, } @inproceedings{CTT100855960, author = {Hiroshi Kimura}, title = {Tracking histone and RNA polymerase II modifications in living cells using genetically encoded probes}, booktitle = {}, year = 2021, } @misc{CTT100809906, author = {Hiroshi Kimura and Tetsuya Handa and Yuko Sato}, title = {DNA結合タンパク質の結合領域の近傍に所望のDNA断片を挿入する方法}, howpublished = {RegisteredPatent}, year = 2021, month = {}, note = {特願2018-536938(2017/05/24), 再表2018/042776(2019/08/08), 特許第6943376号(2021/09/13)} }