@article{CTT100596607,
  author = {Yuri Matsuzaki and Yusuke Matsuzaki and Toshiyuki Sato and Yutaka Akiyama},
  title = {In silico screening of protein-protein interactions with all-to-all rigid docking and clustering: an application to pathway analysis},
  journal = {Journal of Bioinformatics and Computational Biology},
  year = 2009,
}

@inproceedings{CTT100593788,
  author = {Masahito Ohue and Yusuke Matsuzaki and Yuri Matsuzaki and Yutaka Akiyama},
  title = {Improvement of all-to-all protein-protein interaction prediction system MEGADOCK},
  booktitle = {The 20th International Conference on Genome Informatics Workshop Poster Proceedings},
  year = 2009,
}

@inproceedings{CTT100593478,
  author = {Yuri Matsuzaki and Yusuke Matsuzaki and Masahito Ohue and Toshiyuki Sato and Yutaka Akiyama},
  title = {A computational screening system of protein-protein interactions using tertiary structure data: an application to signaling pathway analysis.},
  booktitle = {Proc. BIOINFO 2009 CBI-KSBSB Joint Conference},
  year = 2009,
}

@inproceedings{CTT100593486,
  author = {Masahito Ohue and Yusuke Matsuzaki and Yuri Matsuzaki and Yutaka Akiyama},
  title = {Improvement of all-to-all protein-protein interaction prediction system MEGADOCK},
  booktitle = {Proc. BIOINFO 2009 CBI-KSBSB Joint Conference},
  year = 2009,
}

@inproceedings{CTT100593481,
  author = {Yusuke Matsuzaki and Yuri Matsuzaki and Masakazu Sekijima and Yutaka Akiyama},
  title = {Protein structure sampling based on molecular dynamics and improvement of docking prediction},
  booktitle = {Proc. BIOINFO 2009 CBI-KSBSB Joint Conference},
  year = 2009,
}

@inproceedings{CTT100589920,
  author = {大上雅史 and 松崎裕介 and 松崎由理 and 秋山泰},
  title = {網羅的タンパク質間相互作用予測システムにおける判別精度の改良},
  booktitle = {研究報告バイオ情報学（BIO）},
  year = 2009,
}

@inproceedings{CTT100589560,
  author = {Yuri Matsuzaki and Yusuke Matsuzaki and Masahito Ohue and Toshiyuki Sato and Yutaka Akiyama},
  title = {In silico screening of protein-protein interactions with all-to-all rigid docking and clustering: an application to pathway analysis},
  booktitle = {},
  year = 2009,
}

@inproceedings{CTT100589564,
  author = {Takeshi Sakurada and Moriyoshi Koizumi and Sachio Nohara and Chihiro Okada and Yuri Matsuzaki and Masaru Tomita},
  title = {E-Cell IDE: an integrated modelling and simulation environment for systems-biology},
  booktitle = {},
  year = 2009,
}

@inproceedings{CTT100590384,
  author = {松崎裕介 and 松崎由理 and 関嶋政和 and 秋山泰},
  title = {分子動力学法に基づくタンパク質構造サンプリングとドッキング予測の改良},
  booktitle = {情報処理学会研究報告},
  year = 2009,
}

@inproceedings{CTT100586434,
  author = {Yuri Matsuzaki and Yusuke Matsuzaki and Masahito Ohue and Toshiyuki Sato and Yutaka Akiyama},
  title = {A computational screening system of protein-protein interactions using tertiary structure data: with application to pathway analysis},
  booktitle = {},
  year = 2009,
}

@inproceedings{CTT100576892,
  author = {大上雅史 and 松崎裕介 and 松崎由理 and 佐藤智之 and 秋山泰},
  title = {物理化学的相互作用の導入による網羅的タンパク質間相互作用予測システムの高精度化},
  booktitle = {研究報告バイオ情報学（BIO）},
  year = 2009,
}

@inproceedings{CTT100572567,
  author = {松崎由理},
  title = {形状相補性に基づくall-to-allドッキングによる網羅的なタンパク質間相互作用予測},
  booktitle = {},
  year = 2009,
}

@inproceedings{CTT100572568,
  author = {松崎 由理 and 松崎 裕介 and 大上雅史 and 佐藤 智之 and 秋山 泰},
  title = {ドッキング後処理によるPPI検出システムの応用と評価～EGFRシグナル伝達系への適用にむけて},
  booktitle = {},
  year = 2009,
}

@inproceedings{CTT100576740,
  author = {櫻田剛史 and 小泉守義 and 野原祥夫 and 岡田千尋 and 松崎由理 and 冨田勝},
  title = {E-Cell IDE: システムバイオロジーのためのモデリング・シミュレーション統合環境},
  booktitle = {情報処理学会 研究報告},
  year = 2009,
}