@article{CTT100874619,
  author = {Steven Hayward and Akio Kitao},
  title = {The role of the half-turn in determining structures of Alzheimer’s Aβ wild-type and mutants},
  journal = {Journal of Structural Biology},
  year = 2021,
}

@article{CTT100874622,
  author = {Hiroaki Hata and Duy Phuoc Tran and Marzouk and Akio Kitao},
  title = {Binding free energy of protein/ligand complexes calculated using dissociation Parallel Cascade Selection Molecular Dynamics and Markov state model},
  journal = {Biophysics and Physicobiology},
  year = 2021,
}

@article{CTT100874620,
  author = {Takeo Yamawaki and Misao Mizuno and Haruto Ishikawa and Kazuhiro Takemura and Akio Kitao and Yoshitsugu Shiro and Yasuhisa Mizutani},
  title = {Regulatory Switching by Concerted Motions on the Microsecond Time Scale of the Oxygen Sensor Protein FixL},
  journal = {The Journal of Physical Chemistry B},
  year = 2021,
}

@article{CTT100851847,
  author = {Duy Phuoc Tran and Akio Kitao},
  title = {Using molecular dynamics simulations to prioritize and understand AI-generated cell penetrating peptides},
  journal = {Scientific Reports},
  year = 2021,
}

@article{CTT100874638,
  author = {Akio Kitao},
  title = {Delineating the conformational landscape of the adenosine A<sub>2A</sub> receptor during G protein coupling.},
  journal = {Cell},
  year = 2021,
}

@inproceedings{CTT100874806,
  author = {Akio Kitao},
  title = {Transport mechanisms of ions, peptides and proteins through the biological membrane},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100874805,
  author = {Akio Kitao},
  title = {Roles of hydration/dehydration for dissociation, association and stabilization of protein complexes},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100874809,
  author = {Ryunosuke Kiuchi and Kazuhiro Takemura and Akio Kitao},
  title = {Application of ColDock to docking of cryptic pockets},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100874803,
  author = {Akio Kitao},
  title = {Molecular movie of protein association/dissociation dynamics},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100874812,
  author = {Kazuhiro Takemura and Akio Kitao},
  title = {Unguided Binding MD of Protein-Protein Complexes by PPI-ColDock},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100874811,
  author = {Duy Tran and Akio Kitao},
  title = {DNA bending enhances the dissociation of tetrameric p53’s coredomains},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100874802,
  author = {Akio Kitao},
  title = {PaCS-MD/MSM to investigate protein motions and association/dissociation of protein complexes},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100874820,
  author = {Duy Phuoc Tran and Akio Kitao},
  title = {Binding free energy calculation with dPaCS-MD/MSM},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100874807,
  author = {Duy Phuoc Tran and Akio Kitao},
  title = {Atomic mechanism of the complete association of intrinsically disordered peptide to protein},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100874819,
  author = {Duy Tran and Akio Kitao},
  title = {Predicting the complex conformations of protein/intrinsically disordered peptide complexes},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100874800,
  author = {Akio Kitao},
  title = {Simulated dissociation/association dynamics between proteins and other molecules},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100874818,
  author = {チャン フ ズイ and 畑 宏明 and 中矢 光 and 北尾彰朗},
  title = {Benchmarking the free energy calculation of PaCS-MD/MSM},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100851915,
  author = {北尾彰朗},
  title = {インシリコシミュレーションで探るタンパク質複合体の結合親和性とキネティックス},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100874816,
  author = {Marzouk and Akio Kitao},
  title = {Investigating the dissociation process and kinetic rates of DBD-p53/DNA complex by PaCS-MD and MSM},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100874817,
  author = {竹村 和浩 and 北尾 彰朗},
  title = {PPI-ColDock 法を用いた蛋白質‐ 蛋白質複合体形成},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100874813,
  author = {宮澤 佳希 and Tran Phuoc Duy and 竹村 和浩 and 北尾 彰朗},
  title = {Parallel Cascade Selection Molecular Dynamics/Markov State Model によるタンパク質－タンパク質複合体の結合親和性評価 (Evaluation of binding affinity for protein-protein complexes by Parallel Cascade Selection Molecular Dynamics/Markov State Model},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100874814,
  author = {Wijaya Tegar N. and 北尾彰朗},
  title = {Dynamics of Close-Open State of CALB Obtained by Parallel Cascade Molecular Dynamics Simulation and The 2.Wijaya Tegar N.、北尾彰朗「Dynamics of Close-Open State of CALB Obtained by Parallel Cascade Molecular Dynamics Simulation and The Markov State Model},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100851914,
  author = {北尾彰朗},
  title = {SARS-CoV-2 エンドリボヌクレアーゼのオリゴマー化阻害},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100847106,
  author = {Mariko Kojima and Yuki Hishikawa and Satoshi Abe and Tadaomi Furuta and Duy Phuoc Tran and Akio Kitao and Takafumi Ueno},
  title = {Energy Analysis of Miniprotein by in Vivo Protein Crystallization},
  booktitle = {},
  year = 2021,
}

@inproceedings{CTT100851869,
  author = {Tegar Nurwahyu Wijaya and Akio Kitao},
  title = {Dynamics of Close-Open State of Candida antarctica Lipase B Obtained by Parallel Cascade Molecular Dynamics Simulation and The Markov State Model},
  booktitle = {},
  year = 2021,
}

@misc{CTT100875329,
  author = {Duy Phuoc Tran and Akio Kitao},
  title = {Calculation of Binding Free Energy and Kinetic Rates with Flexible Protein Docking},
  year = 2021,
}

@misc{CTT100893719,
  author = {北尾 彰朗},
  title = {東京工業大学生命理工学院 北尾研究室},
  year = 2021,
}