@article{CTT100917368, author = {Miki Okuno and Yuta Mochimaru and Kentaro Matsuoka and Takahiro Yamabe and Luisa Matiz-Ceron and Takamichi Jogahara and Atsushi Toyoda and Asato Kuroiwa and Takehiko Itoh}, title = {Chromosomal-level assembly of Tokudaia osimensis, Tokudaia tokunoshimensis, and Tokudaia muenninki genomes}, journal = {Scientific Data}, year = 2023, } @article{CTT100908340, author = {Minoru Moriyama and Yudai Nishide and Takema Fukatsu and Minoru Moriyama and Yudai Nishide and Atsushi Toyoda and Takehiko Itoh and Takema Fukatsu}, title = {Complete genomes of mutualistic bacterial co-symbionts "Candidatus Sulcia muelleri" and "Candidatus Nasuia deltocephalinicola" of the rice green leafhopper Nephotettix cincticeps}, journal = {Microbiol Resour Announs}, year = 2023, } @article{CTT100917370, author = {Issei Nakazato and Miki Okuno and Takehiko Itoh and Nobuhiro Tsutsumi and Shin‐ichi Arimura}, title = {Characterization and development of a plastid genome base editor, ptpTALECD}, journal = {The Plant Journal}, year = 2023, } @article{CTT100908285, author = {Kohei Nagao and Yoshiki Tanaka and Rei Kajitani and Atsushi Toyoda and Takehiko Itoh and Souichirou Kubota and Yuji Goto}, title = {Bioinformatic and fine-scale chromosomal mapping reveal the nature and evolution of eliminated chromosomes in the Japanese hagfish, Eptatretus burgeri, through analysis of repetitive DNA families}, journal = {PLoS One}, year = 2023, } @article{CTT100917369, author = {Takeaki Taniguchi and Miki Okuno and Takahiro Shinoda and Fumiya Kobayashi and Kazuki Takahashi and Hideaki Yuasa and Yuta Nakamura and Hiroyuki Tanaka and Rei Kajitani and Takehiko Itoh}, title = {GINGER: an integrated method for high-accuracy prediction of gene structure in higher eukaryotes at the gene and exon level}, journal = {DNA Research}, year = 2023, } @article{CTT100899188, author = {Takahiro Yamabe and Rei Kajitani and Atsushi Toyoda and Takehiko Itoh}, title = {Chromosomal-level genome assembly of the coffee bee hawk moth reveals the evolution of chromosomes and the molecular basis of distinct phenotypes}, journal = {Genome Biology and Evolution}, year = 2023, } @article{CTT100899184, author = {Hiroyuki Tanaka and Tatsuki Hori and Shohei Yamamoto and Atsushi Toyoda and Kentaro Yano and Kyoko Yamane and Takehiko Itoh}, title = {Haplotype-resolved chromosomallevel assembly of wasabi (Eutrema japonicum) genome}, journal = {Scientific Data}, year = 2023, } @article{CTT100899178, author = {Shun Ouchi and Rei Kajitani and Takehiko Itoh}, title = {GreenHill: a de novo chromosome‑level scaffolding and phasing tool using Hi‑C}, journal = {Genome Biology}, year = 2023, } @article{CTT100917416, author = {Tatsuya Miyata and Itsuki Taniguchi and Keiji Nakamura and Yasuhiro Gotoh and Dai Yoshimura and Takehiko Itoh and Shinichiro Hirai and Eiji Yokoyama and Makoto Ohnishi and Sunao Iyoda and Yoshitoshi Ogura and Tetsuya Hayashi}, title = {Alteration of a Shiga toxin-encoding phage associated with a change in toxin production level and disease severity in Escherichia coli}, journal = {Microbial Genomics}, year = 2023, } @article{CTT100917417, author = {Jia Hui Wan and Lee-Mei Ng and Soon Zher Neoh and Rei Kajitani and Takehiko Itoh and Susumu Kajiwara and Kumar Sudesh}, title = {Complete genome sequence of Aquitalea pelogenes USM4 (JCM19919), a polyhydroxyalkanoate producer}, journal = {Archives of Microbiology}, year = 2023, } @inproceedings{CTT100908161, author = {塙⼤輝 and ⽥中裕之 and 五島剛太 and 伊藤武彦}, title = {ハネモの全ゲノム配列構築}, booktitle = {}, year = 2023, } @inproceedings{CTT100908162, author = {⼩野島孝雄 and ⽴花和則 and 伊藤武彦}, title = {エダアシクラゲ(Cladonema radiatum)のゲノム配列内における性特異的領域の特定}, booktitle = {}, year = 2023, } @inproceedings{CTT100908163, author = {山部貴央 and 伊藤武彦}, title = {比較ゲノム解析による鱗翅目昆虫の染色体進化の解明}, booktitle = {}, year = 2023, } @inproceedings{CTT100917402, author = {佐藤桜雅 and 八尋逸清 and Chakraborty Tapas and 入路光雄 and 伊藤武彦 and 長野直樹 and 松山倫也 and 太田耕平}, title = {ゲノム編集と組換え濾胞刺激ホルモンによるマサバの生殖統御の試み}, booktitle = {}, year = 2023, } @inproceedings{CTT100908160, author = {今井大智 and 伊藤武彦}, title = {相同染色体間の差異を考慮したゲノム配列構築手法の開発}, booktitle = {}, year = 2023, } @inproceedings{CTT100917403, author = {吉田 悠 and 西村 陽介 and 伊藤 萌 and 長谷川 万純 and 髙野 剛史 and 後藤 恭宏 and 伊藤 武彦 and 林 哲也 and 吉澤 晋}, title = {センジュナマコ(Scotoplanes sp.)体壁・管足の細菌叢を優占する細菌 の発見とゲノム解析}, booktitle = {}, year = 2023, } @inproceedings{CTT100917396, author = {小坂七海 and 原田佳樹 and 中里一星 and 奥野未来 and 伊藤武彦 and 矢守航 and 堤伸浩 and 有村慎一}, title = {植物オルガネラゲノムの育種利用を目指したランダム変異導入手法の開発}, booktitle = {}, year = 2023, } @inproceedings{CTT100917395, author = {星野 辰彦 and 土居 秀幸 and 伊藤 武彦}, title = {海底下深部堆積物における微生物叢の成り立ちと適応}, booktitle = {}, year = 2023, } @inproceedings{CTT100917393, author = {木村 優希 and Matiz Luisa and 奥野 未来 and 伊藤 武彦 and 水島 秀成 and 黒岩 麻里}, title = {古顎類エミューにおける精巣決定遺伝子DMRT1の発現解析と卵巣決定候補遺伝子の探索}, booktitle = {}, year = 2023, } @inproceedings{CTT100917401, author = {Barnuevo Kyle Dominic and Katoh Hironori and Mohapatra Sipra and Itoh Takehiko and Matsuyama Michiya and Chakraborty Tapas and Ohta Kohei}, title = {Sex-related and temperature-dependent responses of transient receptor potential cation channel subfamily vanilloid (TRPVs) genes in chub mackerel.}, booktitle = {}, year = 2023, } @inproceedings{CTT100917400, author = {Galotta Mariel and Chakraborty Tapas and Ogino Yukiko and Saitou Marie and Nagano Naoki and Itoh Takehiko and Matsuyama Michiya and Ohta Kohei}, title = {Epigenetic modulation of reproductive relative genes in adult chub mackerel Scomber Japonicus during reproductive season.}, booktitle = {}, year = 2023, } @inproceedings{CTT100917399, author = {Galotta Mariel and Chakraborty Tapas and Ogino Yukiko and Saitou Marie and Nagano Naoki and Itoh Takehiko and Matsuyama Michiya and Ohta Kohei}, title = {Epigenetic modulation of reproductive relative genes in adult chub mackerel Scomber Japonicus during reproductive season.}, booktitle = {}, year = 2023, } @inproceedings{CTT100917398, author = {八尋逸清 and 佐藤桜雅 and Chakraborty Tapas and Mohapatra Sipra and 伊藤武彦 and 杣本智軌 and 松山倫也 and 太田耕平}, title = {マサバ Scomber japonicus 体側筋内への自家・他家精巣移植に伴う生理応答}, booktitle = {}, year = 2023, } @inproceedings{CTT100917394, author = {吉原佑哉 and 増村駿介 and 水村航大 and 立山和樹 and Chakraborty Tapas and 豊田敦 and 伊藤武彦 and 高橋史也 and 馬場崇 and 諸橋憲一郎 and 松山倫也 and 長濱嘉孝 and 太田耕平}, title = {性転換魚ホシササノハベラの生殖腺を用いたシングルセルRNA-seq解析と2種の幹細胞}, booktitle = {}, year = 2023, } @inproceedings{CTT100917397, author = {木村 優希 and Matiz Luisa and 奥野 未来 and 伊 藤 武彦 and 水島 秀成 and 黒岩 麻里}, title = {エミューにおける精巣決定遺伝子DMRT1の発現解析と卵巣決定候補遺伝子の探索}, booktitle = {}, year = 2023, } @inproceedings{CTT100917360, author = {URUNANONT Puntakarn and MIZUSHIMA Shusei and ITOH Takehiko and KUROIWA Asato.}, title = {Eccentric SRY of the Okinawa spiny rat and its sex-determining ability revealed by in silico and in vitro analysis}, booktitle = {}, year = 2023, } @inproceedings{CTT100917359, author = {Matiz Luisa and Miki Okuno and Itoh Takehiko and Mizushima Shusei and Kuroiwa Asato}, title = {Loss of the Y chromosome changes the configuration of the X inactivation center in the genus Tokudaia}, booktitle = {}, year = 2023, } @inproceedings{CTT100917388, author = {中里一星 and 奥野未来 and 伊藤武彦 and 堤伸浩 and 有村慎一}, title = {高活性型の塩基置換酵素ptpTALECD_v2を用いた、シロイヌナズナの葉緑体ゲノムの標的一塩基置換}, booktitle = {}, year = 2023, } @inproceedings{CTT100917389, author = {Shankar Chereddy and Rei Kajitani and Takehiko Itoh and Makoto Kashima and Takashi Makino}, title = {Deciphering metazoan evolution to understand the evolutionary history of Whole-body regeneration}, booktitle = {}, year = 2023, } @inproceedings{CTT100917391, author = {Nanami KOSAKA and Yoshiki HARADA and Issei NAKAZATO and 奥野 未来 and 伊藤 武彦 and Wataru YAMORI and Nobuhiro TSUTSUMI and Shin-ichi ARIMURA}, title = {オルガネラゲノム特異的にランダムな変異を導入する2通りの技術の開発}, booktitle = {}, year = 2023, } @inproceedings{CTT100917392, author = {東秀平 and 宇野真 and 八尋逸清 and 北野載 and 豊田敦 and 伊藤武彦 and Chakraborty Tapas and 松山倫也 and 太田耕平}, title = {カタクチイワシの濾胞刺激ホルモン(Fsh)とその受容体}, booktitle = {}, year = 2023, } @inproceedings{CTT100917362, author = {Tatsuki Kinugawa and Yasuhiro Tanizawa and Yasukazu Nakamura and Takehiko Itoh and Hiroyuki Tanaka and Hideki Hirakawa and Akihisa Shinozawa and Tadashi Baba and Kenji Oda and Daisuke Ide and Katsuyuki Yamato and Megumi Ishimaru}, title = {Comparative genomic analysis of 25 peach varieties}, booktitle = {}, year = 2023, } @inproceedings{CTT100917361, author = {Issei Nakazato and Miki Okuno and Takehiko Itoh and Nobuhiro Tsutsumi and Shin-ichi Arimura}, title = {Targeted C-to-T base editing in the plastid genome of Arabidopsis thaliana by plastid-targeting base editors, ptpTALECD and ptpTALECD_v2}, booktitle = {}, year = 2023, } @inproceedings{CTT100917365, author = {Nanami KOSAKA and Yoshiki HARADA and Issei NAKAZATO and Miki OKUNO and Takehiko ITOH and Wataru YAMORI and Nobuhiro TSUTSUMI and Shin-ichi ARIMURA}, title = {Development Of ATechnology For The Induction Of Plant-Organelle- Genome-Specific Random Mutagenesis}, booktitle = {}, year = 2023, } @inproceedings{CTT100917366, author = {Makoto Kashima and Rei Komura and Rei Kajitani and Takehiko Itoh and Atsushi Toyoda}, title = {Knowledge and remaining questions of adult pluripotent stem cell in freshwater planarians.}, booktitle = {}, year = 2023, } @inproceedings{CTT100917390, author = {Shankar Chereddy and Rei Kajitani and Miho Hosaka and Takehiko Itoh and Makoto Kashima and Takashi Makino}, title = {Elucidating the role of epigenetic factors in chromatin modification during regeneration of a planaria}, booktitle = {}, year = 2023, } @inproceedings{CTT100915947, author = {Minami Imamoto and Haruna Nakamura and Mitsuto Aibara and Takehiko Itoh and Masato Nikaido}, title = {Did egg-eater lose the ecological competition? Strong population bottleneck in matumbi hunter the paedophage}, booktitle = {}, year = 2023, } @inproceedings{CTT100891443, author = {田中 裕之 and 堀立樹 and 山本祥平 and 豊田敦 and 矢野健太郎 and 山根京子 and 伊藤武彦}, title = {ワサビゲノム解読の現状}, booktitle = {}, year = 2023, } @inproceedings{CTT100888102, author = {賈云帆 and 相原光人 and 長澤竜樹 and 伊藤武彦 and 二階堂雅人}, title = {透明ナマズとその近縁種を用いた発現変動遺伝子解析による筋肉透明化遺伝子の探索}, booktitle = {}, year = 2023, } @inproceedings{CTT100891445, author = {Takahiro Yamabe and Rei Kajitani and Atsushi Toyoda and Takehiko Itoh}, title = {Chromosome-Level De Novo Genome Assembly and Comparative Genome Analysis of the Coffee Bee Hawk Moth, Cephonodes Hylas}, booktitle = {}, year = 2023, } @inproceedings{CTT100891446, author = {Shun Ouchi and Rei Kajitani and Takehiko Itoh}, title = {GreenHill: A De Novo Chromosome-Level Scaffolding and Phasing Tool Using Hi-C}, booktitle = {}, year = 2023, }