Journal Paper

• Rin Sueda, Kento Yoshida, Masahiko Onodera, Toshiaki Fukui, Rie Yatsunami, Satoshi Nakamura. Characterization of a GlgC homolog from extremely halophilic archaeon Haloarcula japonica, Bioscience, Biotechnology, and Biochemistry, Vol. 85, No. 6, pp. 441-1447, June 2021.  Official location  
• Ying Yang, Rie Yatsunami, Ai Ando, Nobuhiro Miyoko, Toshiaki Fukui, Shinichi Takaichi, Satoshi Nakamura. Complete Biosynthetic Pathway of the C50 Carotenoid Bacterioruberin from Lycopene in the Extremely Halophilic Archaeon Haloarcula japonica, Journal of Bacteriology, Vol. 197, No. 9, pp. 1614-1623, Aug. 2015.  Official location  
• Kimiko Endo, Kohei Nagao, Kinuka Tooyama, Shiyunsei Ishida, Tetsuya Fukazawa, Rie Yatsunami, Toshiaki Fukui, Xin-Hui Xing, Satoshi Nakamura. Cloning of a Chitinase Gene from Newly Isolated Alkaliphilic Nocardiopsis sp. Strain F96 and Extracellular Production of the Recombinant Protein in Escherichia coli, J. Jpn. Soc. Extr., Vol. 14, No. 1, p. 21-29, June 2015.
• Rie Yatsunami, Ai Ando, Yang Zhang, Shinichi Takaichi, Masahiro Kohno, Yuriko Matsumura, Hiroshi Ikeda, Toshiaki Fukui, Kaoru Nakasone, Nobuyuki Fujita, MITSUO SEKINE, Tomonori Takashina, Satoshi Nakamura. Identification of carotenoids from the extremely halophilic archaeon Haloarcula japonica, Frontiers in Microbiology, Vol. 5, pp. 100-105, 2014.
• Teppei tadikara, Toshitaka Matsubara, Yoshihiro Kubota, Takayuki Kosaka, Takatoshi Ozawa, Wataru Tsukimura, Rie Yatsunami, Toshiaki Fukui, Kaoru Nakasone, Tomonori Takashina, Satoshi Nakamura. Gene expression and characterization of aerotaxis transducer HemAT from extremely halohilic archaeon Haloarcula japonica TR-1, J. Jpn. Soc. Extremophiles, Vol. 12, No. 1, pp. 29-32, Aug. 2013.
• Masahiko Onodera, Rie Yatsunami, Wataru Tsukimura, Toshiaki Fukui, Kaoru Nakasone, Tomonori Takashina, Satoshi Nakamura. Gene analysis, expression and characterization of an intracellular α-amylase from extremely halophilic archaeon Haloarcula japonica, Biosci. Biotechnol. Biochem., vol. 77, pp. 281-288, 2013.
• Chen, S., Huang, Z., Wu, J., Chen, Y., Ye, F., Zhang, C., Rie Yatsunami, Satoshi Nakamura, Xing, X.-H.. Combination of site-directed mutagenesis and calcium ion addition for enhanced production of thermostable MBP-fused heparinase i in recombinant Escherichia coli, Applied Microbiology and Biotechnology, Vol. 97, No. 7, pp. 2907-2916, 2013.
• F. Uni, S. Lee, Rie Yatsunami, T. Fukui, S. Nakamura. Mutational analysis of a CBM family 5 chitin-binding domain of an alkaline chitinase from Bacillus sp. J813, Biosci. Biotechnol. Biochem., Vol. 76, pp. 530-535, 2012.
• Chen, S., Ye, F., Chen, Y., Chen, Y., Zhao, H., Rie Yatsunami, Satoshi Nakamura, Arisaka, F., Xing, X.-H.. Biochemical analysis and kinetic modeling of the thermal inactivation of MBP-fused heparinase I: Implications for a comprehensive thermostabilization strategy, Biotechnology and Bioengineering, Vol. 108, No. 8, pp. 1841-1851, 2011.
• Rie Yatsunami. 極限環境微生物学会研究奨励賞受賞研究 高度好塩性古細菌に由来する機能性タンパク質の解析, 極限環境生物学会誌 = Journal of Japanese Society for Extremophiles, [極限環境生物学会]学会事務局, Vol. 10, No. 1, pp. 17-22, 2011.
• R. Yazawa, J. Takakura, Tomoko Sakata, Ihsanawati, R. Yatsunami, T. Fukui, T. Kumasaka, Nobuo Tanaka, Satoshi Nakamura. A calcium-dependent xylan-binding domain of alkaline xylanase from alkaliphilic Bacillus sp. strain 41M-1, Biosci. Biotechnol. Biochem., Vol. 75, pp. 379-381, 2011.
• 梅本 博仁, 谷澤 里沙, 高倉 淳, Rie Yatsunami, TOSHIAKI FUKUI, Satoshi Nakamura. 立体構造に基づくアルカリキシラナーゼの機能ドメイン解析と好アルカリ性向上, Journal of applied glycoscience, 日本応用糖質科学会, Vol. 57, No. 2, pp. 145-150, Apr. 2010.
• Rie Yatsunami, Motoaki Sato, Keita Orishimo, Yoshinobu Hatori, Yang Zhang, Tomonori Takashina, Toshiaki Fukui, Satoshi Nakamura. Gene Expression and Characterization of a Novel GH Family 18 Chitinase from Extremely Halophilic Archaeon Halobacterium salinarum NRC-1, J. Jpn. Soc. Extremophiles, vol. 9, 19-24, 2010.
• Y. Zhang, Zen An, R. Yatsunami, M. Sato, K. Orishimo, Y. Hatori, T. Fukui, S. Nakamura. Characterization of a haloarchaeal GH family 18 chitinase with additional acidic amino acids on its protein surface, J. Jpn. Soc. Extremophiles, Vol. 9, pp. 72-74, 2010.
• Wataru Tsukimura, Keiko Watanabe, Chihiro Morokuma, Rie Yatsunami, Toshiaki Fukui, Satoshi Nakamura. Improvement of Alkaliphily of Thermostable GH Family 10 Xylanase from Thermotoga maritima by Directed Evolution, J. Jpn. Soc. Extremophiles, vol. 9, pp. 15−18, 2010.
• Hirohito Umemoto, Ihsanawati, Mayuko Inami, Rie Yatsunami, Toshiaki Fukui, Satoshi Nakamura. Improvement of Alkaliphily of Bacillus Alkaline Xylanase by Introducing Amino Acid Substitutions Both on Catalytic Cleft and Protein Surface, Biosci. Biotechnol. Biochem., vol. 73, 965-967, 2009.
• Hirohito Umemoto, Risa Yazawa, Jun Takakura, Rie Yatsunami, Toshiaki Fukui, Satoshi Nakamura. Analysis of Functional Domains and Improvement of Alkaliphily of an Alkaline Xylanase on the Basis of its Three-dimensional Structure, J. Appl. Glycosci., vol. 57, 145-150, 2009.
• Naoya Koizumi, Sumiko masuda, Kiyoe Maeda, Yuya Isoda, Rie Yatsunami, Toshiaki Fukui, Satoshi Nakamura. Additional Carbohydrate-binding Modules Enhance Insoluble Substrate-hydrolytic Activity of β-1,3-glucanase from Alkaliphilic Nocardiopsis sp. F96, Biosci. Biotechnol. Biochem., Vol. 73, 1078-1082, 2009.
• T. Sakata, Hiroyuki Miyakubo, Osada Yuko, Rieko Wada, Hidenori Takahashi, R. Yatsunami, T. Fukui, S. Nakamura. Functional improvement of xylanase by introducing mutated xylan-binding domain, J. Appl. Glycosci., Vol. 53, pp. 131-136, 2006.
• Sumiko masuda, Kimiko Endo, Naoya Koizumi, Tokusuke Yayami, Tetsuya Fukazawa, Rie Yatsunami, Toshiaki Fukui, Satoshi Nakamura. Molecular identification of a novel β-1,3-glucanase from alkaliphilic Nocardiopsis sp. strain F96, Extremophiles, Vol. 10, pp. 251-255, 2006.
• Akio Takenaka, Wataru Adachi, Yuri Sakihama, Satoru Shimizu, Tomoko Sunami, Tetsuya Fukazawa, Mamie Suzuki, Rie Yatsunami, Satoshi Nakamura. Various Chitosanase Developed from Different Structural Kingdoms, Chitin Chitosan Res.,, Vol. 11, pp. 1-13, 2005.
• K. Ozawa, Takeyori Harashina, R. Yatsunami, S. Nakamura. Gene cloning, expression and partial characterization of cell division protein FtsZ1 from extremely halophilic archaeon Haloarcula japonica strain TR-1, Extremophiles, Vol. 9, pp. 281-288, 2005.
• Ihsanawati, Takashi Kumasaka, Tomonori Kaneko, Chihiro Morokuma, Rie Yatsunami, Takao SATO, Satoshi Nakamura, Nobuo Tanaka. Structural basis of the substrate subsite and the highly thermal stability of xylanase 10B from Thermotoga maritima MSB8, Proteins, Vol. 61, pp. 999-1009, 2005.
• Y. Sakihama, W. Adachi, Satoru Shimizu, Tomoko Sunami, T. Fukazawa, M. Suzuki, R. Yatsunami, S. Nakamura, A. Takenaka. Crystallizations and Preliminary X-ray Analyses of the Active and the Inactive Forms of Family GH-8 Chitosanase with Subclass II Specificity from Bacillus sp. Strain K17, Acta Cryst.,, Vol. D60, pp. 2081-2083, 2004.
• W. Adachi, S. Shimizu, T. Sunami, T. Fukazawa, Y. Sakihama, M. Suzuki, R. Yatsunami, S. Nakamura, A. Takenaka. Crystal structure of family GH-8 chitosanase with subclass II specificity from Bacillus sp. K17, J. Mol. Biol., Vol. 343, pp. 785-795, 2004.
• K. Endo, T. Fukazawa, R. Yatsunami, S. Nakamura. Molecular cloning of a family 18 chitinase gene from alkaliphilic Nocardiopsis sp. strain F96, Chitin Chitosan Res., Vol. 9, pp. 150-151, 2003.
• T. Matsuo, A. Ikeda, N. Hirota, Daisuke Sugimori, R. Yatsunami, S. Nakamura. Cloning and expression of Haloarcula japonica ferredoxin gene, and characterization of recombinant proteins, Porphyrins, Vol. 11, p. 108, 2002.
• Rie Yatsunami, Tomonori Kawakami, Hiroyuki Ohtani, Satoshi Nakamura. A novel bacteriorhodopsin-like protein from Haloarcula japonica strain TR-1: Gene cloning, sequencing and transcript analysis, Extremophiles, Vol. 4, pp. 109-144, 2000.

Other Publication

• Rie Yatsunami. 古細菌のカロテノイド生合成経路(<特集>カロテノイド研究開発の現状と展望), 生物工学会誌 : seibutsu-kogaku kaishi, 日本生物工学会, Vol. 93, No. 7, pp. 394-396, 2015.
• Rie Yatsunami. 極限環境微生物が合成するカロテノイド : バクテリオルベリン(バイオミディア), 生物工学会誌 : seibutsu-kogaku kaishi, 日本生物工学会, Vol. 90, No. 11, 2012.
• Rie Yatsunami, Satoshi Nakamura. 好塩菌に備わった分子ポンプ (特集1 バイオと化学産業の接点) -- (第2章 バイオマテリアル), 化学装置, 工業調査会, Vol. 45, No. 4, pp. 66-68, 2003.
• Rie Yatsunami, Satoshi Nakamura. 生体分子と自己修復, 化学と教育, 公益社団法人 日本化学会, Vol. 49, No. 3, pp. 122-125, 2000.
• Rie Yatsunami, Satoshi Nakamura. ＳＩＮＥ配列に学ぶ生命の進化, 化学と生物, Japan Society for Bioscience, Biotechnology, and Agrochemistry, Vol. 36, No. 8, pp. 523-524, July 1998.
• Rie Yatsunami, Satoshi Nakamura. クジラDNAに刻まれた生命の起源, 化学と工業 = Chemistry and chemical industry, Vol. 51, No. 6, 1998.

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