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Publication List - Tadaomi Furuta (254 entries)
Journal Paper
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Robin Raja,
Tadaomi Furuta,
Dandan Zhao,
Kazuaki Matsumura.
Molecular mechanism of protein aggregation inhibition with sulfobetaine polymers and their hydrophobic derivatives,
Cell Rep. Phys. Sci.,
vol. 5,
no. 6,
pp. 102012,
May 2024.
-
Genki Imaizumi,
Kazutaka Ushio,
Hidenori Nishihara,
Ingo Braasch,
Erika Watanabe,
Shiori Kumagai,
Tadaomi Furuta,
Koji Matsuzaki,
Michael Romero,
Akira Kato,
Ayumi Nagashima.
Functional divergence in solute permeability between ray-finned fish-specific paralogs of aqp10,
Genome Biol. Evol.,
vol. 16,
no. 1,
pp. evad221,
Jan. 2024.
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Basudev Maity,
Jiaxin Tian,
Tadaomi Furuta,
Satoshi Abe,
Takafumi Ueno.
Atomic-level insights into a unique semi-clathrate hydrate formed in a confined environment of porous protein crystal,
Cryst. Growth Des.,
vol. 23,
no. 10,
pp. 7448-7458,
Sept. 2023.
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Haruka Kono,
Satoshi Hara,
Tadaomi Furuta,
Hiroshi Ichinose.
Binding profile of quinonoid-dihydrobiopterin to quinonoid-dihydropteridine reductase examined by in silico and in vitro analyses,
J Biochem,
vol. 174,
no. 5,
pp. 441-450,
Aug. 2023.
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Yuki Ohmuro-Matsuyama,
Hayato Matsui,
Masaki Kanai,
Tadaomi Furuta.
Glow-type conversion and characterization of a minimal luciferase via mutational analyses,
FEBS J.,
vol. 290,
no. 23,
pp. 5554-5565,
Aug. 2023.
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Sung Bae Kim,
Tadaomi Furuta,
Nobuo Kitada,
Shojiro A. Maki.
Creation of artificial luciferase 60s from sequential insights and their applications to bioassays,
Sensors,
vol. 23,
no. 14,
pp. 6376,
July 2023.
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Sung Bae Kim,
Genta Kamiya,
Tadaomi Furuta,
Nobuo Kitada,
Shojiro A. Maki.
Coelenterazine indicators for the specific imaging of human and bovine serum albumins,
Sensors,
vol. 23,
no. 13,
pp. 6020,
June 2023.
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Yuki Ohmuro-Matsuyama,
Hayato Matsui,
Masaki Kanai,
Tadaomi Furuta.
Improving bioluminescence of a minimal luciferase by adding a charged oligopeptide: picALuc2.0,
Biotechnol. J.,
vol. 18,
no. 6,
pp. e2200560,
Mar. 2023.
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Ayumu Kobayashi,
Masamune Nakamura,
Masaru Tsujii,
Kohei Makino,
Tatsuya Nagayama,
Kensuke Nakamura,
Kei Nanatani,
Kera Kota,
Yuki Furuuchi,
Shunsuke Kayamori,
Tadaomi Furuta,
Iwane Suzuki,
Yoshihiro Hayakawa,
Tanudjaja Ellen,
Yasuhiro Ishimaru,
Nobuyuki Uozumi.
Two cyanobacterial response regulators with diguanylate cyclase activity, Rre2 and Rre8, participate in biofilm formation,
Mol. Microbiol.,
vol. 119,
no. 5,
pp. 59-611,
Mar. 2023.
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Sung Bae Kim,
Tadaomi Furuta,
Genta Kamiya,
Nobuo Kitada,
Ramasamy Paulmurugan,
Shojiro A. Maki.
Bright molecular strain probe templates for reporting protein–protein interactions,
Sensors,
vol. 23,
no. 7,
pp. 3498,
Mar. 2023.
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Sung Bae Kim,
Tadaomi Furuta,
Yuki Ohmuro-Matsuyama,
Nobuo Kitada,
Ryo Nishihara,
Shojiro A. Maki.
Bioluminescent imaging systems boosting near-infrared signals in mammalian cells,
Photochem. Photobiol. Sci.,
Feb. 2023.
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Mariko Kojima,
Satoshi Abe,
Tadaomi Furuta,
Duy Phuoc Tran,
Kunio Hirata,
Keitaro Yamashita,
Yuki Hishikawa,
Akio Kitao,
Takafumi Ueno.
Engineering of an in-cell protein crystal for fastening a metastable conformation of a target miniprotein,
Biomater. Sci.,
vol. 11,
no. 4,
pp. 1350-1357,
Feb. 2023.
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Ellen Tanudjaja,
Naomi Hoshi,
Kaneyoshi Yamamoto,
Kunio Ihara,
Tadaomi Furuta,
Masaru Tsujii,
Yasuhiro Ishimaru,
Nobuyuki Uozumi.
Two Trk/Ktr/HKT-type potassium transporters, TrkG and TrkH perform distinct functions in Escherichia coli K-12,
J. Biol. Chem.,
vol. 299,
no. 2,
pp. 102846,
Feb. 2023.
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Genta Kamiya,
Nobuo Kitada,
Tadaomi Furuta,
Takashi Hirano,
Shojiro A. Maki,
Sung Bae Kim.
S-series coelenterazine-driven combinatorial bioluminescence imaging systems for mammalian cells,
Int. J. Mol. Sci.,
vol. 24,
no. 2,
pp. 1420,
Jan. 2023.
-
Genta Kamiya,
Nobuo Kitada,
Tadaomi Furuta,
Takashi Hirano,
Shojiro Maki,
Sung Bae Kim.
C-series coelenterazine-driven bioluminescence signature imaging,
Int. J. Mol. Sci.,
vol. 23,
no. 21,
pp. 13047,
Oct. 2022.
-
Shigetaka Nishiguchi,
Tadaomi Furuta,
Takayuki Uchihashi.
Multiple dimeric structures and strand-swap dimerization of E-cadherin in solution visualized by high-speed atomic force microscopy,
Proc. Natl. Acad. Sci. U.S.A.,
vol. 119,
no. 30,
pp. e2208067119,
July 2022.
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Yuki Ohmuro-Matsuyama,
Tadaomi Furuta,
Hayato Matsui,
Masaki Kanai,
Hiroshi Ueda.
Miniaturization of bright light-emitting luciferase ALuc: picALuc,
ACS Chem. Biol.,
vol. 17,
no. 4,
pp. 864-872,
Mar. 2022.
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Kosuke Kikuchi,
Tatsuya Fukukyama,
Takayuki Uchihashi,
Tadaomi Furuta,
Yusuke Maeda,
Takafumi Ueno.
Protein needles designed to self-assemble through needle tip engineering,
Small,
vol. 18,
no. 10,
pp. 2106401,
Jan. 2022.
Official location
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Kazutaka Ushio,
Erika Watanabe,
Takehiro Kamiya,
Ayumi Nagashima,
Tadaomi Furuta,
Genki Imaizumi,
Toru Fujiwara,
Michael F. Romero,
Akira Kato.
Boric acid transport activity of human aquaporins expressed in Xenopus oocytes,
Physiol. Rep.,
vol. 10,
no. 1,
pp. e15164,
Jan. 2022.
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Akihiko Nakamura,
Takashi Kanazawa,
Tadaomi Furuta,
Minoru Sakurai,
Markku Saloheimo,
Masahiro Samejima,
Anu Koivula,
Kiyohiko Igarashi.
Role of tryptophan 38 in loading substrate chain into the active-site tunnel of cellobiohydrolase I from Trichoderma reesei,
J. Appl. Glycosci.,
vol. 68,
no. 1,
pp. 19-29,
Mar. 2021.
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Ryosuke Hirano,
Takashi Kagamiya,
Yoko Matsumoto,
Tadaomi Furuta,
Minoru Sakurai.
Molecular mechanism underlying the selective attack of trehalose lipids on cancer cells as revealed by coarse-grained molecular dynamics simulations,
Biochem. Biophys. Rep.,
vol. 25,
pp. 100913,
Jan. 2021.
-
Chihiro Uehara,
Kota Takeda,
Tatsuki Ibuki,
Tadaomi Furuta,
Naomi Hoshi,
Ellen Tanudjaja,
Nobuyuki Uozumi.
Analysis of Arabidopsis TPK2 and KCO3 reveals structural properties required for K+ channel function,
Channels,
vol. 14,
no. 1,
pp. 336-346,
Oct. 2020.
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Basudev Maity,
Zhipeng Li,
Kento Niwase,
Christian Ganser,
Tadaomi Furuta,
Takayuki Uchihashi,
Diannan Lu,
Takafumi Ueno.
Single-molecule level dynamic observation of disassembly of the apo-ferritin cage in solution,
Phys. Chem. Chem. Phys.,
vol. 22,
no. 33,
pp. 18562-18572,
Sept. 2020.
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Ko Ishikawa,
Chihiro Chubachi,
Saeko Tochigi,
Naomi Hoshi,
Seiji Kojima,
Mamoru Hyodo,
Yoshihiro Hayakawa,
Tadaomi Furuta,
Kota Kera,
Nobuyuki Uozumi.
Functional characterization of multiple PAS domain-containing diguanylate cyclases in Synechocystis sp. PCC 6803,
Microbiology,
vol. 166,
no. 7,
pp. 659-688,
July 2020.
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Takafumi Ueno,
Kento Niwase,
Daisho Tsubokawa,
Kosuke Kikuchi,
Natsumi Takai,
Tadaomi Furuta,
Ryuji Kawano,
Takayuki Uchihashi.
Dynamic behavior of an artificial protein needle contacting a membrane observed by high-speed atomic force microscopy,
Nanoscale,
vol. 12,
no. 15,
pp. 8166-8173,
Apr. 2020.
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Takao Furuki,
Yuta Takahashi,
Rie Hatanaka,
Takahiro Kikawada,
Tadaomi Furuta,
Minoru Sakurai.
Group 3 LEA protein model peptides suppress heat-induced lysozyme aggregation. Elucidation of the underlying mechanism using coarse-grained molecular simulations,
J. Phys. Chem. B,
vol. 124,
no. 14,
pp. 2747-2759,
Apr. 2020.
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Tetsuya Kadonosono,
Wanaporn Yimchuen,
Yumi Ota,
Kyra See,
Tadaomi Furuta,
Tadashi Shiozawa,
Maika Kitazawa,
Yu Goto,
Akash Patil,
Takahiro Kuchimaru,
Shinae Kizaka-Kondoh.
Design Strategy to Create Antibody Mimetics Harbouring Immobilised Complementarity Determining Region Peptides for Practical Use,
Sci. Rep.,
vol. 10,
pp. 891,
Jan. 2020.
-
Tsubasa Iino,
Minoru Sakurai,
Tadaomi Furuta.
A novel ring-shaped reaction pathway with interconvertible intermediates in chitinase A as revealed by QM/MM simulation combined with a one-dimensional projection technique,
Phys. Chem. Chem. Phys.,
vol. 21,
no. 45,
pp. 24956-24966,
Dec. 2019.
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Tatsushi Nishimoto,
Yuta Takahashi,
Shohei Miyama,
Tadaomi Furuta,
Minoru Sakurai.
Replica exchange molecular dynamics simulation study on the mechanism of desiccation-induced structuralization of an intrinsically disordered peptide as a model of LEA proteins,
Biophys. Physicobiol.,
vol. 16,
pp. 196-204,
Nov. 2019.
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Naohiko Shimada,
Hirotaka Kinoshita,
Takuma Umegae,
Satomi Azumai,
Nozomi Kume,
Takuro Ochiai,
Tomoka Takenaka,
Wakako Sakamoto,
Takayoshi Yamada,
Tadaomi Furuta,
Tsukuru Masuda,
Minoru Sakurai,
Hideo Higuchi,
Atsushi Maruyama.
Cationic copolymer‐chaperoned 2D–3D reversible conversion of lipid membranes,
Adv. Mater.,
vol. 31,
no. 44,
pp. 1904032,
Nov. 2019.
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Shun Amemiya,
Hayato Toyoda,
Mami Kimura,
Hiromi Saito,
Hiroshi Kobayashi,
Kunio Ihara,
Kiyoto Kamagata,
Ryuji Kawabata,
Setsu Kato,
Yutaka Nakashimada,
Tadaomi Furuta,
Shin Hamamoto,
Nobuyuki Uozumi.
The mechanosensitive channel YbdG from Escherichia coli has a role in adaptation to osmotic up-shock,
J. Biol. Chem.,
vol. 294,
no. 33,
pp. 12281-12292,
Aug. 2019.
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Ryosuke Hirano,
Tsubasa Yabuchi,
Minoru Sakurai,
Tadaomi Furuta.
Development of an ATP force field for coarse-grained simulation of ATPases and its application to the maltose transporter,
J. Comput. Chem.,
vol. 40,
no. 24,
pp. 2096-2102,
May 2019.
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Sotaro Kuroyanagi,
Naohiko Shimada,
Shota Fujii,
Tadaomi Furuta,
Atsushi Harada,
Kazuo Sakurai,
Atsushi Maruyama.
Highly ordered polypeptide with UCST phase separation behavior,
J. Am. Chem. Soc.,
vol. 141,
no. 3,
pp. 1261-1268,
Jan. 2019.
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Akihiko Nakamura,
Kei-ichi Okazaki,
Tadaomi Furuta,
Minoru Sakurai,
Ryota Iino.
Processive chitinase is Brownian monorail operated by fast catalysis after peeling rail from crystalline chitin,
Nat. Commun.,
vol. 9,
pp. 3841,
Sept. 2018.
-
Wei-Lin Hsu,
Tadaomi Furuta,
Minoru Sakurai.
The mechanism of nucleotide-binding domain dimerization in the intact maltose transporter as studied by all-atom molecular dynamics simulations,
Proteins,
vol. 86,
no. 2,
pp. 237-247,
Feb. 2018.
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Mitsuhiko Odera,
Tadaomi Furuta,
Yoshiro Sohma,
Minoru Sakurai.
Molecular dynamics simulation study on the structural instability of the most common cystic fibrosis-associated mutant ΔF508-CFTR,
Biophys. Physicobiol.,
vol. 15,
pp. 33-44,
Feb. 2018.
-
Naoki Arai,
Tadaomi Furuta,
Minoru Sakurai.
Analysis of an ATP-induced conformational transition of ABC transporter MsbA using a coarse-grained model,
Biophys. Physicobiol.,
vol. 14,
pp. 161-171,
Dec. 2017.
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Shigenobu Mitsuzawa,
Maiko Fukuura,
Satoru Shinkawa,
Keiichi Kimura,
Tadaomi Furuta.
Alanine substitution in cellobiohydrolase provides new insights into substrate threading,
Sci. Rep.,
vol. 7,
pp. 16320,
Nov. 2017.
-
Daiki Tatsumi,
Kei Nanatani,
Yuto Koike,
Kiyoto Kamagata,
Satoshi Takahashi,
Ayumu Konno,
Tadaomi Furuta,
Minoru Sakurai,
Nobuyuki Uozumi.
Probing native metal ion association sites through quenching of fluorophores in the nucleotide binding domains of the ABC transporter MsbA,
Biochem. J.,
vol. 474,
no. 12,
pp. 1993-2007,
May 2017.
-
Tadaomi Furuta,
Yukiko Sato,
Minoru Sakurai.
Structural Dynamics of the Heterodimeric ABC Transporter TM287/288 Induced by ATP and Substrate Binding,
Biochemistry,
vol. 55,
no. 48,
pp. 6730-6738,
Dec. 2016.
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Takao Furuki,
Takahiro Watanabe,
Tadaomi Furuta,
Kiyoshi Takano,
Ryo Shirakashi,
Minoru Sakurai.
The dry preservation of giant vesicles using a Group 3 LEA protein model peptide and its molecular mechanism,
Bull. Chem. Soc. Jpn.,
vol. 89,
no. 12,
pp. 1493-1499,
Dec. 2016.
-
Wei-Lin Hsu,
Tadaomi Furuta,
Minoru Sakurai.
ATP hydrolysis mechanism in a maltose transporter explored by QM/MM metadynamics simulation,
J. Phys. Chem. B,
vol. 120,
no. 43,
pp. 11102-11112,
Nov. 2016.
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Shuntaro Chiba,
Tadaomi Furuta,
Seishi Shimizu.
Kirkwood-Buff integrals for aqueous urea solutions based upon the quantum chemical electrostatic potential and interaction energies,
J.Phys. Chem. B,
vol. 120,
no. 31,
pp. 7714-7723,
Aug. 2016.
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Honami Sakaizwa,
Hiroshi C. Watanabe,
Tadaomi Furuta,
Minoru Sakurai.
Thermal fluctuations enable rapid protein-protein associations in aqueous solution by lowering the reaction barrier,
Chem. Phys. Lett.,
vol. 643,
pp. 114-118,
Jan. 2016.
-
Wei-Lin Hsu,
Tadaomi Furuta,
Minoru Sakurai.
Analysis of the free energy landscapes for the opening-closing dynamics of the maltose transporter ATPase MalK2 using enhanced sampling MD simulation,
J. Phys. Chem. B,
vol. 119,
no. 30,
pp. 9717-9725,
July 2015.
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Tomohiko Hayashi,
Shuntaro Chiba,
Yusuke Kaneta,
Tadaomi Furuta,
Minoru Sakurai.
ATP-induced conformational changes of nucleotide-binding domains in an ABC transporter. Importance of the water-mediated entropic force,
J. Phys. Chem. B,
vol. 118,
no. 44,
pp. 12612-12620,
Nov. 2014.
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Tomoka Furukawa-Hagiya,
Norio Yoshida,
Shuntaro Chiba,
Tomohiko Hayashi,
Tadaomi Furuta,
Yoshiro Sohma,
Minoru Sakurai.
Water-mediated forces between the nucleotide binding domains generate the power stroke in an ABC transporter,
Chem. Phys. Lett.,
vol. 616-617,
pp. 165-170,
Nov. 2014.
-
Feng Xu,
Yusuke Sudo,
Sho Sanechika,
Junpei Yamashita,
Sho Shimaguchi,
Shun-ichiro Honda,
Chiho Sumi-Ichinose,
Masayo Mori-Kojima,
Rieko Nakata,
Tadaomi Furuta,
Minoru Sakurai,
Masahiro Sugimoto,
Tomoyoshi Soga,
Kazunao Kondo,
Hiroshi Ichinose.
Disturbed biopterin and folate metabolism in the Qdpr-deficient mouse,
FEBS Lett.,
vol. 588,
no. 21,
pp. 3924-3931,
Nov. 2014.
-
Tetsuya Kadonosono,
Etsuri Yabe,
Tadaomi Furuta,
Akihiro Yamano,
Takuya Tsubaki,
Takuya Sekine,
Takahiro Kuchimaru,
Minoru Sakurai,
Shinae Kizaka-Kondoh.
A fluorescent protein scaffold for presenting structurally constrained peptides provides an effective screening system to identify high affinity target-binding peptides,
PLOS ONE,
vol. 9,
no. 8,
pp. e103397,
Aug. 2014.
-
Tadaomi Furuta,
Tomohiro Yamaguchi,
Hiroaki Kato,
Minoru Sakurai.
Analysis of the structural and functional roles of coupling helices in the ABC transporter MsbA through enzyme assays and molecular dynamics simulations,
Biochemistry,
vol. 53,
no. 26,
pp. 4261-4272,
July 2014.
-
Ji Yang,
Tadaomi Furuta,
Minoru Sakurai,
Hiroshi Tsutsumi,
Hisakazu Mihara.
A Computational Study of the Interaction of Amphiphilic α-Helical Cell-Penetrating Peptides with Heparan Sulfate,
Bull. Chem. Soc. Jpn.,
vol. 87,
no. 10,
pp. 1074-1082,
July 2014.
-
Ji Yang,
Hiroshi Tsutsumi,
Tadaomi Furuta,
Minoru Sakurai,
Hisakazu Mihara.
Interaction of Amphiphilic α-Helical Cell-Penetrating Peptides with Heparan Sulfate,
Org. Biomol. Chem.,
vol. 12,
no. 26,
pp. 4673-4681,
Apr. 2014.
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Akihiko Nakamura,
Takeshi Tsukada,
Sanna Auer,
Tadaomi Furuta,
Masahisa Wada,
Anu Koivula,
Kiyohiko Igarashi,
Masahiro Samejima.
The tryptophan residue at the active site tunnel entrance of Trichoderma reesei cellobiohydrolase Cel7A is important for initiation of degradation of crystalline cellulose,
J. Biol. Chem.,
vol. 288,
no. 19,
pp. 13503-13510,
May 2013.
-
Yurika Watanabe,
Wei-Lin Hsu,
Shuntaro Chiba,
Tomohiko Hayashi,
Tadaomi Furuta,
Minoru Sakurai.
Dynamics and structural changes induced by ATP and/or substrate binding in the inward-facing conformation state of P-glycoprotein,
Chem. Phys. Lett.,
vol. 557,
pp. 145-149,
Feb. 2013.
-
Tomoka Furukawa-Hagiya,
Tadaomi Furuta,
Shuntaro Chiba,
Yoshiro Sohma,
Minoru Sakurai.
The power stroke driven by ATP binding in CFTR as studied by molecular dynamics simulations,
J. Phys. Chem. B,
vol. 117,
no. 1,
pp. 83-93,
Jan. 2013.
-
Yasuhiro Matsunaga,
Hiroshi Fujisaki,
Tohru Terada,
Tadaomi Furuta,
Kei Moritsugu,
Akinori Kidera.
Minimum free energy path of ligand-induced transition in adenylate kinase,
PLoS Comput. Biol.,
vol. 8,
no. 6,
pp. e1002555,
June 2012.
-
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Ken Okamoto,
Silke Leimkühler,
Takeshi Nishino.
Different inhibitory potency of febuxostat towards mammalian and bacterial xanthine oxidoreductases: insight from molecular dynamics,
Sci. Rep.,
vol. 2,
pp. 331,
Mar. 2012.
-
Tadaomi Furuta,
Kentaro Shimizu,
Tohru Terada.
Accurate prediction of native tertiary structure of protein using molecular dynamics simulation with the aid of the knowledge of secondary structures,
Chem. Phys. Lett.,
vol. 472,
no. 1-3,
pp. 134-139,
Apr. 2009.
-
Tadaomi Furuta,
Yoshimi Fujitsuka,
George Chikenji,
Shoji Takada.
In silico chaperonin-like cycle helps folding of proteins for structure prediction,
Biophys. J.,
vol. 94,
no. 7,
pp. 2558-2565,
Apr. 2008.
-
Tadaomi Furuta,
Fadel A. Samatey,
Hideyuki Matsunami,
Katsumi Imada,
Keiichi Namba,
Akio Kitao.
Gap compression/extension mechanism of bacterial flagellar hook as the molecular universal joint,
J. Struct. Biol.,
Vol. 157,
No. 3,
pp. 481-490,
Mar. 2007.
Official location
-
Hiroshi Arikawa,
Shingo Masuda,
Tadaomi Furuta,
Wenzhen Jin,
Sung-Joon Park,
Shoji Takada,
Kazutoshi Fujikawa,
Hideki Sunahara.
A computing system for protein structure prediction with trial-and-error process,
IPSJ Trans. ACS,
vol. 46,
no. SIG12(ACS11),
pp. 407-419,
Aug. 2005.
-
Tadaomi Furuta,
Kuniyoshi Ebina.
An effective kinetic model with a threshold length in a finite-volume system for the dynamics of cytoskeletal filaments,
J. Korean Phys. Soc.,
vol. 46,
no. 3,
pp. 610-614,
Mar. 2005.
Official location
-
Kazutoshi Fujikawa,
Wenzhen Jin,
Sung-Joon Park,
Tadaomi Furuta,
Shoji Takada,
Hiroshi Arikawa,
Susumu Date,
Shinji Shimojo.
Applying a grid technology to protein structure predictor "ROKKY",
Stud. Health Technol. Inform.,
vol. 112,
pp. 27-36,
Mar. 2005.
-
Tadaomi Furuta,
Kuniyoshi Ebina.
Length distributions of cytoskeletal filaments in the lattice polymerization model: an effective kinetic model for a linear polymerization with a threshold length,
Bussei Kenkyu (Kyoto),
vol. 81,
no. 2,
pp. 220-221,
Nov. 2003.
Official location
-
Tadaomi Furuta,
Kuniyoshi Ebina.
A lattice model for cytoskeletons' dynamics: analysis of growth and shrinkage,
Physica A,
vol. 314,
no. 1-4,
pp. 162-169,
July 2002.
-
Tadaomi Furuta,
Kuniyoshi Ebina.
A lattice model for a linear polymer oscillation,
AIP Conf. Proc.,
vol. 519,
pp. 516-518,
June 2000.
Book
-
Tadaomi Furuta,
Minoru Sakurai.
Functional Mechanisms of ABC Transporters as Revealed by Molecular Simulations,
The Role of Water in ATP Hydrolysis Energy Transduction by Protein Machinery (M. Suzuki (ed.)),
Springer, Singapore,
pp. 179-201,
May 2018.
-
Tetsuya Kadonosono,
Yumi Ota,
Wanaporn Yimchuen,
Kyra See,
Tadaomi Furuta,
Takahiro Kuchimaru,
Shinae Kondoh.
Creation of High Performance Antibody Drug Alternatives Harboring Constrained CDR Peptides,
PEPTIDE SCIENCE 2017 (I. Fujii (ed.)),
The Japanese Peptide Society, Osaka,
pp. 126-127,
Mar. 2018.
-
Tadaomi Furuta,
Kuniyoshi Ebina.
Analysis of the growth and shrinkage velocity of a single polymer: a lattice polymerization model in two dimensions,
Similarity in Diversity (S. Fujita, H. Hara, D. L. Morabito, Y. Okamura (eds.)),
Nova Science publishers, New York,
pp. 227-232,
Aug. 2003.
Domestic Conference (Reviewed)
-
Haruka Kono,
Satoshi Hara,
Tadaomi Furuta,
Hiroshi Ichinose.
Analysis of the binding profile of quinonoid-form of dihydropteridine to quinonoid-dihydropteridine reductase,
CBI Annual Meeting 2023,
Oct. 2023.
-
Wanaporn Yimchuen,
Tetsuya Kadonosono,
Kyra See,
Tadaomi Furuta,
Takahiro Kuchimaru,
Shinae Kondoh.
Development of anti-HER2 antibody mimetics with structurally constrained CDR peptides,
The 54th Japanese Peptide Symposium,
Nov. 2017.
-
Tetsuya Kadonosono,
Yumi Ota,
Wanaporn Yimchuen,
Kyra See,
Tadaomi Furuta,
Takahiro Kuchimaru,
Shinae Kondoh.
Creation of high performance antibody drug alternatives harboring constrained CDR peptides,
The 54th Japanese Peptide Symposium,
Nov. 2017.
-
Tatsushi Nishimoto,
Tadaomi Furuta,
MINORU SAKURAI.
Study of desiccation-induced structural changes of G3LEA peptides using replica exchange molecular dynamics simulation,
低温生物工学会,
Cryobiol. Cryotech.,
vol. 63,
no. 2,
pp. 119-123,
Oct. 2017.
-
Wanaporn Yimchuen,
Tetsuya Kadonosono,
Tadaomi Furuta,
Takahiro Kuchimaru,
Shinae Kondoh.
Development of high-affinity tumor imaging probes based on constrained target-binding peptides,
12th Annual Meeting of the Japanese Society for Molecular Imaging,
May 2017.
-
Ryohei Yamaguchi,
Takao Furuki,
Tadaomi Furuta,
Minoru Sakurai.
Physicochemical properties of non-repeat sequences in a G3LEA protein PvLEA4,
Cryobiol. Cryotech.,
vol. 62,
no. 2,
pp. 133-137,
Oct. 2016.
-
Makoto Usui,
Tadaomi Furuta,
Minoru Sakurai.
Computational study on the molecular mechanism of the desiccation tolerance induced by G3LEA proteins,
Cryobiol. Cryotech.,
vol. 62,
no. 2,
pp. 127-131,
Oct. 2016.
-
Ken Okamoto,
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Takeshi Nishino.
Dynamic analysis of the substrate binding pocket in xanthine oxidoreductase,
Gout and Nucleic Acid Metabolism,
Japanese Society of Gout and Nucleic Acid Metabolism,
vol. 40,
no. 1,
p. 80,
July 2016.
Official location
-
Misa Banno,
Hiroshi C. Watanabe,
Tadaomi Furuta,
Minoru Sakurai.
Analysis of free energy and structural change of G3LEA peptide in the binding process to a POPC bilayer,
Cryobiol. Cryotech.,
vol. 61,
no. 2,
pp. 105-109,
Oct. 2015.
-
Makoto Usui,
Takao Furuki,
Tadaomi Furuta,
Minoru Sakurai.
Analysis of Group3LEA model peptide-protein interaction by molecular dynamics simulation,
Cryobiol. Cryotech.,
vol. 60,
no. 2,
pp. 89-92,
Oct. 2014.
-
Kentaro Yamakawa,
Takao Furuki,
Tadaomi Furuta,
Rie Hatanaka,
Takahiro Kikawada,
Tatsuya Niwa,
Hideki Taguchi,
Hiroyuki Furusawa,
Yoshio Okahata,
Minoru Sakurai.
Experimental study on the mechanism underlying the anti-aggregation function of a Group3LEA peptide,
Cryobiol. Cryotech.,
vol. 59,
no. 2,
pp. 95-99,
Oct. 2013.
-
Kentaro Yamakawa,
Takao Furuki,
Tadaomi Furuta,
Minoru Sakurai.
Computational study on the mechanism underlying the anti-aggregation function of a Group3LEA peptide,
Cryobiol. Cryotech.,
vol. 59,
no. 2,
pp. 101-105,
Oct. 2013.
International Conference (Not reviewed / Unknown)
-
Ayumu Kobayashi,
Masamune Nakamura,
Masaru Tsujii,
Kohei Makino,
Tatsuya Nagayama,
Kensuke Nakamura,
Kei Nanatani,
Kera Kota,
Yuki Furuuchi,
Shunsuke Kayamori,
Tadaomi Furuta,
Iwane Suzuki,
Yoshihiro Hayakawa,
Tanudjaja Ellen,
Yasuhiro Ishimaru,
Nobuyuki Uozumi.
Two cyanobacterial response regulators participate in biofilm formation,
Taiwan-Japan Plant Biology 2023,
Oct. 2023.
-
Sung Bae Kim,
Genta Kamiya,
Nobuo Kitada,
Tadaomi Furuta,
Takashi Hirano,
Shojiro A. Maki.
C- and S-Series Coelenterazine-Driven Bioluminescence Signature Imaging,
World Molecular Imaging Congress (WMIC) 2023,
Sept. 2023.
-
Shigetaka Nishiguchi,
Tadaomi Furuta,
Takayuki Uchihashi.
Visualization of binding processes and cluster formation of cadherin using high-speed atomic force microscopy,
AFM BioMed Conference 2022,
Aug. 2022.
-
Yuki Ohmuro,
Tadaomi Furuta,
Hayato Matsui,
Masaki Kanai,
Hiroshi Ueda.
Development of the smallest luciferase “picALuc” among bright-light emitting luciferases,
2021 online symposium of the 21st ISBC & XIX ISLS,
June 2021.
-
Kazutaka Ushio,
Jin Akimoto,
Genki Imaizumi,
Erika Watanabe,
Tadaomi Furuta,
Michael F. Romer,
Akira Kato.
Analysis of Mechanisms for Substrate Transport Selectivity in An Aquaglyceroporin AQP10,
TOIN 15th International Symposium on Biomedical Engineering,
Nov. 2020.
-
Ryosuke Hirano,
Tsubasa Yabuchi,
Minoru Sakurai,
Tadaomi Furuta.
Development of an ATP force field for coarse-grained simulation of ATPases and its application to the maltose transporter,
The 63rd Annual Meeting of the Biophysical Society,
Mar. 2019.
-
Akihiko Nakamura,
Kei-ichi Okazaki,
Tadaomi Furuta,
Minoru Sakurai,
Ryota Iino.
Processive chitinase is burnt-bridge Brownian motor operated by fast catalysis after peeling rail from crystalline chitin,
The 63rd Annual Meeting of the Biophysical Society,
Biophys. J.,
vol. 116,
no. 3,
p. 486a,
Mar. 2019.
-
Tadaomi Furuta,
Tomohiro Yamaguchi,
Hiroaki Kato,
Minoru Sakurai.
Structural and functional roles of coupling helices in ABC transporter MsbA: Experimental and computational studies,
The International Chemical Congress of Pacific Basin Societies 2015 (Pacifichem 2015),
Dec. 2015.
-
Tomohiko Hayashi,
Shuntaro Chiba,
Tadaomi Furuta,
Minoru Sakurai.
Free energy calculation for the ATP-induced dimerization of the nucleotide-binding domains in a maltose transporter: Importance of the water-mediated entropic force,
The International Chemical Congress of Pacific Basin Societies 2015 (Pacifichem 2015),
Dec. 2015.
-
Tomoka Hagiya,
Norio Yoshida,
Shuntaro Chiba,
Tomohiko Hayashi,
Tadaomi Furuta,
Minoru Sakurai.
3D-RISM study of water-meditated forces between the nucleotide binding domains responsible for the power stroke in an ABC transporter,
The International Chemical Congress of Pacific Basin Societies 2015 (Pacifichem 2015),
Dec. 2015.
-
Wei-Lin Hsu,
Tadaomi Furuta,
Minoru Sakurai.
Analysis of the free energy landscape for the open-close dynamics of maltose transporter ATPase, MalK, using enhanced sampling MD simulation,
The International Chemical Congress of Pacific Basin Societies 2015 (Pacifichem 2015),
Dec. 2015.
-
Tetsuo Kokubu,
Tomohiro Yaita,
Tadaomi Furuta,
Minoru Sakurai.
Study of the photoactivation mechanisms of AsLOV2 and LOV-HTH using accelerated molecular dynamics simulations,
16th International Conference on Retinal Proteins,
Oct. 2014.
-
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Ken Okamoto,
Silke Leimkühler,
Takeshi Nishino.
The loop opening motion of the bacterial XOR with the inhibitor BOF: molecular dynamics study,
10th Triennial Congress of the World Association of Theoretical and Computational Chemists (WATOC 2014),
Oct. 2014.
-
Hiroyuki Tamura,
Shuntaro Chiba,
Tadaomi Furuta,
Shun Sakuraba,
Nobuyuki Matubayasi,
Minoru Sakurai.
Study of the mechanism of the light-driven ion transport in halorhodopsin based on the free energy calculations,
16th International Conference on Retinal Proteins,
Oct. 2014.
-
Ken Okamoto,
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Silke Leimkühler,
Takeshi Nishino.
The gate opening motion of xanthine binding pocket of XOR,
IUBMB Symposium: The 18th International Symposium on Flavins and Flavoproteins,
June 2014.
-
Akihiko Nakamura,
Takeshi Tsukada,
Sanna Auer,
Tadaomi Furuta,
Masahisa Wada,
Anu Koivula,
Kiyohiko Igarashi,
Masahiro Samejima.
Molecular mechanisms for cellulose hydrolysis of glycoside hydrolase family 7 cellobiohydrolases from fungi,
Gordon Research Conference: Cellulosomes, Cellulases & Other Carbohydrate Modifying Enzymes,
Aug. 2013.
-
Akihiko Nakamura,
Takeshi Tsukada,
Sanna Auer,
Tadaomi Furuta,
Masahisa Wada,
Anu Koivula,
Kiyohiko Igarashi,
Masahiro Samejima.
Molecular mechanisms for cellulose hydrolysis of glycoside hydrolase family 7 cellobiohydrolases from fungi,
Gordon Research Seminar: Cellulosomes, Cellulases & Other Carbohydrate Modifying Enzymes (GRS),
Aug. 2013.
-
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Ken Okamoto,
Takeshi Nishino.
Molecular dynamics and free energy analysis of xanthine oxidoreductase-ligand interactions,
Theory and Applications of Computational Chemistry (TACC-2012),
Sept. 2012.
-
Ken Okamoto,
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Silke Leimkühler,
Takeshi Nishino.
MD simulations elucidate the difference of active site movement of mammalian and bacterial XOR,
Molybdenum and Tungsten Enzyme Conference,
Aug. 2011.
-
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Ken Okamoto,
Silke Leimkühler,
Takeshi Nishino.
Structure-based inhibitor mechanism of febuxostat for xanthine oxidoreductase: molecular dynamics study,
9th triennial congress of the World Association of Theoretical and Computational Chemists (WATOC 2011),
July 2011.
Domestic Conference (Not reviewed / Unknown)
-
Shumpei Saito,
Manato Ishida,
Takashi Kanamori,
Tadaomi Furuta,
HIDEYA YUASA,
Takeshi Hata.
ニトロアレーンとアリールグリニャール反応剤の位置選択的[5,5]-転位を経由するアミノビフェノール合成のDFT計算,
日本化学会第104春季年会,
Mar. 2024.
-
Haruka Kono,
Satoshi Hara,
Tadaomi Furuta,
Hiroshi Ichinose.
葉酸代謝とビオプテリン代謝の接点,
第472回ビタミンB研究協議会,
Sept. 2023.
-
Ellen Tanudjaja,
Naomi Hoshi,
Kaneyoshi Yamamoto,
Ikuo Ihara,
Tadaomi Furuta,
Masaru Tsujii,
Yasuhiro Ishimaru,
Nobuyuki Uozumi.
Identification of the Na+ activation site of K+ transporter in Escherichia coli,
75th Annual Meeting of the Society of Biotechnology of Japan (SBJ),
Sept. 2023.
-
Ayumu Kobayashi,
Masamune Nakamura,
Masaru Tsujii,
Kohei Makino,
Tatsuya Nagayama,
Kensuke Nakamura,
Kei Nanatani,
Kera Kota,
Yuki Furuuchi,
Shunsuke Kayamori,
Tadaomi Furuta,
Iwane Suzuki,
Yoshihiro Hayakawa,
Tanudjaja Ellen,
Yasuhiro Ishimaru,
Nobuyuki Uozumi.
Two cyanobacterial response regulators participate in biofilm formation,
75th Annual Meeting of the Society of Biotechnology of Japan (SBJ),
Sept. 2023.
-
Sung-Bae Kim,
Tadaomi Furuta,
Genta Kamiy,
Nobuo Kitad,
Ramasamy Paulmurugan,
Shojiro A Maki.
Bright Molecular Strain Probe Templates For Imaging Protein-Protein Interactions,
72nd Annual Meeting of the Japan Society for Analytical Chemistry,
Sept. 2023.
-
Sung-Bae Kim,
Genta Kamiya,
Nobuo Kitada,
Tadaomi Furuta,
Takashi Hirano,
Shojiro A Maki.
S-Series Coelenterazine-Driven Combinatorial Bioluminescence Imaging Systems for Mammalian Cells,
72nd Annual Meeting of the Japan Society for Analytical Chemistry,
Sept. 2023.
-
Sung-Bae Kim,
Tadaomi Furuta,
Nobuo Kitada,
Shojiro A Maki.
Creation of Artificial Luciferase 60s from Sequential Insights and Their Applications to Bioassays,
72nd Annual Meeting of the Japan Society for Analytical Chemistry,
Sept. 2023.
-
Sung-Bae Kim,
Genta Kamiya,
Tadaomi Furuta,
Nobuo Kitada,
Shojiro A Maki.
Coelenterazine indicators for the specific imaging of human and bovine serum albumins,
72nd Annual Meeting of the Japan Society for Analytical Chemistry,
Sept. 2023.
-
Sung Bae Kim,
Tadaomi Furuta,
Yuki Ohmuro-Matsuyama,
Nobuo Kitada,
Ryo Nishihara,
Shojiro A. Maki.
Near‑infrared luminescence of artificial luciferase ALuc and minimal luciferase picALuc with coelenterazine analogues,
第23回日本蛋白質科学会年会,
July 2023.
-
Yuki Ohmuro-Matsuyama,
Hayato Matsui,
Masaki Kanai,
Tadaomi Furuta.
Adding a peptide to enhance the activity of minimal luciferase: Development of picALuc2.0,
第23回日本蛋白質科学会年会,
July 2023.
-
Nobuyuki Uozumi,
Tanudjaja Ellen,
Naomi Hoshi,
Masaru Tsujii,
Yasuhiro Ishimaru,
Kaneyoshi Yamamoto,
Kunio Ihara,
Tadaomi Furuta.
大腸菌のK取込み輸送体の機能と役割の解析,
第19回大腸菌研究会,
June 2023.
-
Sung Bae Kim,
Genta Kamiya,
Nobuo Kitada,
Tadaomi Furuta,
Takashi Hirano,
Shojiro A. Maki.
C-series coelenterazine-driven bioluminescence signature imaging,
第83回分析化学討論会,
May 2023.
-
Sung Bae Kim,
Tadaomi Furuta,
Yuki Ohmuro-Matsuyama,
Nobuo Kitada,
Ryo Nishihara,
Shojiro A. Maki.
Bioluminescent imaging systems boosting near-infrared signals in mammalian cells,
第83回分析化学討論会,
May 2023.
-
Rio Kimishima,
Hikaru Sohma,
Hiroshi Nakagawa,
Tadaomi Furuta,
Hiroshi Ishiguro,
Kanako Nakao,
Yoshiro Sohma.
Therapeutic drugs developed for CFTR mutants found in Caucasian Cystic Fibrosis patients also succeeded to rescue CFTR mutants found in Japanese patients.,
The 100th Anniversary Annual Meeting of The Physiological Society of Japan,
Mar. 2023.
-
Yuki Ohmuro,
Hayato Matsui,
Masaki Kanai,
Tadaomi Furuta.
Creation and development of the smallest luciferase "picALuc",
The 45th Annual Meeting of the Molecular Biology Society of Japan (MBSJ2022),
Dec. 2022.
-
Haruto Shimizu,
Masamune Nakamura,
Masaru Tsujii,
Ayumu Kobayashi,
Kohei Makino,
Tatsuya Nagayama,
Kensuke Nakamura,
Kei Nanatani,
Kera Kota,
Yuki Furuuchi,
Shunsuke Kayamori,
Tadaomi Furuta,
Iwane Suzuki,
Yoshihiro Hayakawa,
Tanudjaja Ellen,
Yasuhiro Ishimaru,
Nobuyuki Uozumi.
二成分制御系による藍藻のバイオフィルム形成制御,
藍藻の分子生物学2022,
Dec. 2022.
-
Tadaomi Furuta.
分子シミュレーションで探る膜輸送体と糖質分解酵素の構造ダイナミクス,
Rare Events Workshop 2022,
Dec. 2022.
-
Genta Kamiya,
Nobuo Kitada,
Tadaomi Furuta,
Takashi Hirano,
Shojiro Maki,
Sung Bae Kim.
置換基改変型セレンテラジン類縁体合成による発光特性評価と応用法,
The 37th Annual Meeting of the Japan Association for Bioluminescence and Chemiluminescence,
Nov. 2022.
-
Yuki Ohmuro-Matsuyama,
Tadaomi Furuta,
Hayato Matsu,
Masaki Kanai,
Hiroshi Ueda.
Development of the smallest luciferase “picALuc” and its applications,
74th SBJ Annual Meeting,
Oct. 2022.
-
Yuki Ohmuro,
Sung-Bae Kim,
Hayato Matsu,
Masaki Kanai,
Tadaomi Furuta.
Development of the smallest luciferase “picALuc” and its applications,
The 60th Annual Meeting of the Biophysical Society of Japan,
Sept. 2022.
-
Yuki Ohmuro,
Hayato Matsu,
Masaki Kanai,
Tadaomi Furuta.
Development of the applications of a novel small luciferase, picALuc,
The 22nd Annual Meeting of the Protein Science Society of Japan,
June 2022.
-
Yuki Ohmuro,
Tadaomi Furuta,
Hayato Matsu,
Masaki Kanai,
Hiroshi Ueda.
Developments of unique protein-protein interaction assays using luciferases and a novel small luciferase,
The 78th Annual Meeting of the Japanese Society of Microscopy,
May 2022.
-
Shigetaka Nishiguchi,
Tadaomi Furuta,
Takayuki Uchihashi.
動的ダイマーを介した細胞間接着分子の多段階結合過程,
令和3年度日本生物物理学会中部支部会講演会,
Mar. 2022.
-
Ellen Tanudjaja,
Naomi Hoshi,
Tadaomi Furuta,
Kaneyoshi Yamamoto,
Masaru Tsujii,
Yasuhiro Ishimaru,
Nobuyuki Uozumi.
Distinct property of two types of Trk K+ transport system in Escherichia coli,
The 2022 Annual Meeting of the Japan Society for Bioscience, Biotechnology and Agrochemistry,
Mar. 2022.
-
Mariko Kojima,
Yuki Hishikawa,
Satoshi Abe,
Tadaomi Furuta,
Duy Phuoc Tran,
Akio Kitao,
Takafumi Ueno.
Dynamics structural analysis of miniprotein by in-cell crystal engineering,
The 102nd CSJ Annual Meeting (2022),
Mar. 2022.
-
Tadaomi Furuta.
分子シミュレーションで探る膜トランスポーターの構造ダイナミクス,
スーパーコンピュータワークショップ2021「生体分子の構造・機能・デザインの計算科学」,
Jan. 2022.
-
Ayumi Nagashima,
Kazutaka Ushio,
Genki Imaizumi,
Jin Akimoto,
Erika Watanabe,
Tadaomi Furuta,
Michael Romero,
Akira Kat.
Analysis of molecular basis underlying the substrate selectivity in an aquaglyceroporin AQP10,
The 44th Annual Meeting of the Molecular Biology Society of Japan,
Dec. 2021.
-
Ryosuke Hirano,
Minoru Sakurai,
Tadaomi Furuta.
Structural dynamics of the ABC transporter ABCG2 explored by coarse-grained molecular simulations,
The 59th Annual Meeting of the Biophysical Society of Japan,
Nov. 2021.
-
Yuki Ohmuro-Matsuyama,
Tadaomi Furuta,
Hayato Matsui,
Masaki Kanai,
Hiroshi Ueda.
明るい小型発光酵素 "picALuc",
生物発光化学発光研究会第36回学術講演会,
Nov. 2021.
-
Kosuke Kikuchi,
Tatsuya Fukukyama,
Tadaomi Furuta,
Takayuki Uchihashi,
Yusuke Maeda,
Takafumi Ueno.
Controlling the two-dimensional assembly of β-helical protein needles by engineering the distal ends,
第15回バイオ関連化学シンポジウム,
Sept. 2021.
-
Kosuke Kikuchi,
Tatsuya Fukukyama,
Tadaomi Furuta,
Yusuke Maeda,
Takayuki Uchihashi,
Takafumi Ueno.
Modulation of two-dimensional assembly patterns of protein needles by engineering the distal ends,
第70回高分子討論会,
Sept. 2021.
Official location
-
Kosuke Kikuchi,
Tatsuya Fukuyama,
Tadaomi Furuta,
Yusuke T. Maeda,
Takayuki Uchihashi,
Takafumi Ueno.
Constructing the 2D assembly of protein needles by engineering the distal ends,
生体機能関連化学部会 若手の会 第32回 サマースクール,
July 2021.
-
Kosuke Kikuchi,
Tatsuya Fukuyama,
Tadaomi Furuta,
Yusuke T. Maeda,
Takayuki Uchihashi,
Takafumi Ueno.
タンパク質分子針の末端設計による二次元集合パターン制御,
第1回発動分子科学研究会,
June 2021.
-
Shigetaka Nishiguchi,
Tadaomi Furuta,
Takayuki Uchihashi.
高速AFMによる細胞間接着分子の構造ダイナミクスの解析,
第1回発動分子科学研究会,
June 2021.
-
Kota Nakada,
Minoru Sakurai,
Tadaomi Furuta.
Structural changes of the glucose transporter GLUT3 explored by enhanced molecular simulations,
The 21st Annual Meeting of the Protein Science Society of Japan,
June 2021.
-
Mariko Kojima,
Yuki Hishikawa,
Satoshi Abe,
Tadaomi Furuta,
Duy Phuoc Tran,
Akio Kitao,
Takafumi Ueno.
Energy Analysis of Miniprotein by in Vivo Protein Crystallization,
日本化学会第101春季年会,
Mar. 2021.
-
Kosuke Kikuchi,
Tatsuya Fukukyama,
Basudev Maity,
Tadaomi Furuta,
Yusuke Maeda,
Takayuki Uchihashi,
Takafumi Ueno.
Design of the dynamic assembly behaviors of artificial β-helical protein needles,
日本化学会第101春季年会,
Mar. 2021.
-
Jin Akimoto,
Kazutaka Ushio,
Erika Watanabe,
Tadaomi Furuta,
Michel F. Romero,
Akira Kato.
ヒトAQP10とトラフグAQP10の基質選択性の違いに寄与する分子機構の解析,
日本動物学会関東支部第72回大会,
Mar. 2020.
-
Akihiko Nakamura,
Kei-ichi Okazaki,
Furuta Tadaomi,
Minoru Sakurai,
Ryota Iino.
プロセッシブなキチン加水分解酵素はなぜ結晶を壊せるのか,
2019年度(第68回)日本応用糖質科学会大会・応用糖質科学シンポジウム,
Sept. 2019.
-
Akihiko Nakamura,
Kei-ichi Okazaki,
Furuta Tadaomi,
Minoru Sakurai,
Ryota Iino.
New horizon in molecular observation through high-dimensional data-driven and measurement informatics approaches,
The 57th Annual Meeting of the Biophysical Society of Japan,
Sept. 2019.
-
Akihiko Nakamura,
Kei-ichi Okazaki,
Furuta Tadaomi,
Minoru Sakurai,
Ryota Iino.
Crystalline chitin hydrolase is a Burnt-bridge Brownian motor,
The 57th Annual Meeting of the Biophysical Society of Japan,
Sept. 2019.
-
Yuichiro Kanamori,
Furuta Tadaomi,
Minoru Sakurai.
Activation mechanism of the angiotensin II type 1 receptor (AT1R) explored by molecular simulations,
The 57th Annual Meeting of the Biophysical Society of Japan,
Sept. 2019.
-
Yuichiro Kanamori,
Furuta Tadaomi,
Minoru Sakurai.
Molecular dynamics simulation study on the mechanism of constitutively active mutant M257Y of rhodopsin,
The 57th Annual Meeting of the Biophysical Society of Japan,
Sept. 2019.
-
Yuya Yamaura,
Furuta Tadaomi,
Minoru Sakurai.
Analysis of the ATP-induced conformational change of the molecular chaperonin GroEL by coarse-grained simulations using the MARTINI,
The 57th Annual Meeting of the Biophysical Society of Japan,
Sept. 2019.
-
Kota Nakada,
Tadaomi Furuta,
Minoru Sakurai.
Analysis of the conformational changes of glucose transporter 3 (GLUT3) by accelerated molecular dynamics simulation,
The 19th Annual Meeting of the Protein Science Society of Japan,
June 2019.
-
Kazuki Chiba,
Tadaomi Furuta,
Minoru Sakurai.
Computational study of the structural changes and substrate transport mechanism of ABC transporter CFTR,
The 19th Annual Meeting of the Protein Science Society of Japan,
June 2019.
-
Ryosuke Hirano,
Tadaomi Furuta,
Minoru Sakurai.
Coarse-grained MD simulation on the drug-transport dynamics of a transporter ABCG2,
The 19th Annual Meeting of the Protein Science Society of Japan,
June 2019.
-
Haruka Kono,
Tadaomi Furuta,
Satoshi Hara,
Hiroshi Ichinose.
キノノイドジヒドロプテリジン還元酵素の基質認識機構の解析,
The 71st Annual Meeting of the Vitamin Society of Japan,
June 2019.
-
Haruka Kono,
Satoshi Hara,
Tadaomi Furuta,
Hiroshi Ichinose.
分子シミュレーションによるキノノイドジヒドロプテリジン還元酵素の基質認識機構の解析,
The Regular Meeting of The Japanese Biochemical Society, Kato Branch,
June 2019.
-
Tsubasa Iino,
Minoru Sakurai,
Tadaomi Furuta.
特異な反応座標下でのQM/MM metadynamics計算で明らかになったChitinase Aの加水分解機構とその反応中間体,
2019 Spring Meeting of the Society of Computer Chemistry, Japan,
June 2019.
-
Kento NIWASE,
Daisho Tsubokawa,
Natsumi Takai,
Tadaomi Furuta,
Ryuji Kawano,
Takafumi Ueno.
人工タンパク質針の膜貫通反応への先端構造依存性,
The 99th CSJ Annual Meeting,
Mar. 2019.
-
Akihiko Nakamura,
Kei-ichi Okazaki,
Tadaomi Furuta,
Minoru Sakurai,
Ryota Iino.
キチン加水分解酵素の運動メカニズムの解明,
第8回名古屋大学シンクロトロン光研究センターシンポジウム,
Jan. 2019.
-
Kento Niwase,
Tadaomi Furuta,
Takafumi Ueno.
高速原子間力顕微鏡による細胞膜透過性人工タンパク質針の膜接触挙動の一分子解析,
第8回CSJ化学フェスタ2018,
Oct. 2018.
-
Kento Niwase,
Tadaomi Furuta,
Takafumi Ueno.
人工タンパク質針の膜貫通挙動の解明,
The 12th Symposium on Biorelevant Chemistry CSJ,
Sept. 2018.
-
Kazuho Cryershinozuka,
Tadaomi Furuta,
Minoru Sakurai.
Molecular simulation study of the underlying mechanism of multidrug recognition in transcriptional regulators LmrR and QacR,
The 56th Annual Meeting of the Biophysical Society of Japan,
Sept. 2018.
-
Tadaomi Furuta.
Structural and Functional dynamics of ABC transporters explored by molecular simulations,
The 56th Annual Meeting of the Biophysical Society of Japan,
Sept. 2018.
-
Tsubasa Iino,
Tadaomi Furuta,
Minoru Sakurai.
Theoretical analysis of the hydrolysis mechanism in Chitinase A using QM/MM metadynamics simulation,
The 56th Annual Meeting of the Biophysical Society of Japan,
Sept. 2018.
-
Toshihiro Hayashi,
Tadaomi Furuta,
Minoru Sakurai.
QM/MM metadynamics study of the catalytic mechanism of trehalose-6-phosphate phosphatase,
The 56th Annual Meeting of the Biophysical Society of Japan,
Sept. 2018.
-
Kento NIWASE,
Furuta Tadaomi,
Takafumi Ueno.
Motion capture of protein needle interacting membrane surface,
The 79th Okazaki Conference,
Aug. 2018.
-
Tadaomi Furuta.
Computational Approaches to Elucidate the Structural Dynamics of Cellulase Cel7A,
The 32th Annual Meeting of the Cellulase Society,
July 2018.
-
Ryosuke Hirano,
Tadaomi Furuta,
Minoru Sakurai.
Coarse-grained MD simulation on conformational changes of maltose transporter induced by ATP binding,
The 18th Annual Meeting of the Protein Science Society of Japan,
June 2018.
-
Honommi Sakaizawa,
Wei-Lin Hsu,
Tadaomi Furuta,
Minoru Sakurai.
Computational study on the driving force causing the dimerization between nucleotide binding domains in ABC transporters,
The 18th Annual Meeting of the Protein Science Society of Japan,
June 2018.
-
Kazuki Chiba,
Tadaomi Furuta,
Minoru Sakurai.
Computational study of the structural changes and substrate transport mechanism of ABC transporter CFTR,
The 18th Annual Meeting of the Protein Science Society of Japan,
June 2018.
-
Yuichiro Kanamori,
Tadaomi Furuta,
Minoru Sakurai.
Activation mechanism of Angiotensin II type 1 receptor (AT1R) as revealed by molecular dynamics and metadynamics simulations,
The 18th Annual Meeting of the Protein Science Society of Japan,
June 2018.
-
Kota Nakada,
Tadaomi Furuta,
Minoru Sakurai.
Role of transmembrane helix 7 (TM7) in glucose transporter 8 (GLUT8) as revealed by MD simulations,
The 18th Annual Meeting of the Protein Science Society of Japan,
June 2018.
-
Akihiko Nakamura,
Kei-ichi Okazaki,
Tadaomi Furuta,
Minoru Sakurai,
Ryota Iino.
キチン加水分解酵素は1nmステップの”Burnt-bridge” Brownian ratchetである,
2017年度生物物理学会中部支部講演会,
Mar. 2018.
-
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Ken Okamoto,
Takeshi Nishino.
The motion of the substrate in the binding pocket of XOR: molecular dynamics study,
The 55th Annual Meeting of the Biophysical Society of Japan,
Sept. 2017.
-
Honami Sakaizawa,
Tadaomi Furuta,
Minoru Sakurai.
Driving force of hydrophilic protein-protein associations as studied by MD and 3D-RISM calculations,
The 55th Annual Meeting of the Biophysical Society of Japan,
Sept. 2017.
-
Takashi Kagamiya,
Tadaomi Furuta,
Minoru Sakurai.
Molecular dynamics analysis of physical properties of mixed liposomes containing trehalose surfactant with selective anticancer effect,
The 55th Annual Meeting of the Biophysical Society of Japan,
Sept. 2017.
-
Yuta Takahashi,
Tadaomi Furuta,
Minoru Sakurai.
Molecular dynamics study of the protective function of G4LEA model peptide on dried POPC bilayer,
The 55th Annual Meeting of the Biophysical Society of Japan,
Sept. 2017.
-
Tsubasa Yabuchi,
Shun Nanjo,
Tadaomi Furuta,
Minoru Sakurai.
Analysis of molecular dynamics of Cl- channel CFTR using coarse-grained simulation with the Martini force field,
The 17th Annual Meeting of the Protein Science Society of Japan,
June 2017.
-
Yuya Yamaura,
Tadaomi Furuta,
Minoru Sakurai.
Computational calorimetry analysis of the target recognition mechanism of oxidoreductase thioredoxin,
The 17th Annual Meeting of the Protein Science Society of Japan,
June 2017.
-
Yuta Takahashi,
Tadaomi Furuta,
Minoru Sakurai.
Computer simulation study on the mechanism of protection of dried POPC bilayer by G3LEA model peptide,
The 17th Annual Meeting of the Protein Science Society of Japan,
June 2017.
-
Daisho Tsubokawa,
Moe Hiratani,
Ryuji Kawano,
Tadaomi Furuta,
Minoru Sakurai,
Takafumi Ueno.
T4ファージ由来タンパク質針の脂質膜透過機構の解明,
The 97th CSJ Annual Meeting,
Mar. 2017.
-
Shun Amemiya,
Hayato Toyoda,
Shin Hamamoto,
Kiyoto Kamagata,
Tadaomi Furuta,
Kunio Ihara,
Hiromi Saito,
Hiroshi Kobayashi,
Nobuyuki Uozumi.
高浸透圧条件下における大腸菌機械受容チャネルYbdGのC末端領域の機能解析,
The 2017 Annual Meeting of The Japan Society for Bioscience, Biotechnology and Agrochemistry,
Mar. 2017.
-
Shuntaro Chiba,
Tadaomi Furuta,
Seishi Shimizu.
Kirkwood-Buff積分に基づく溶液の分子構造を再現する可分極分子力場の検討 - 尿素溶液を例として,
第30回分子シミュレーション討論会,
Dec. 2016.
-
Kazuho Cryershinozuka,
Tadaomi Furuta,
Minoru Sakurai.
Elucidation of the mechanism of multidrug recognition by a transcriptional repressor LmrR,
The 54th Annual Meeting of the Biophysical Society of Japan,
Nov. 2016.
-
Daisho Tsubokawa,
Tadaomi Furuta,
Minoru Sakurai,
Takafumi Ueno.
T4ファージ由来タンパク質針の脂質二分子膜への結合状態解析,
6th CSJ Chemistry Festa,
Nov. 2016.
-
Wei-Lin Hsu,
Tadaomi Furuta,
Minoru Sakurai.
Molecular dynamics investigation of the full maltose transporter with and without the maltose binding protein MalE,
The 54th Annual Meeting of the Biophysical Society of Japan,
Nov. 2016.
-
Yoshimi Kunishima,
Masako Kobayashi,
Atsuko Yamashita,
Tadaomi Furuta,
Kazunari Akiyoshi,
Taka Nakahara,
Masato S Ota.
Honokiol promotes osteoblastic differentiation via RXR,
The 39th Annual Meeting of the Molecular Biology Society of Japan,
Nov. 2016.
-
Wanaporn Yimchuen,
Tetsuya Kadonosono,
Tadaomi Furuta,
Tadashi Shiozawa,
Maika Kitazawa,
Takahiro Kuchimaru,
Minoru Sakurai,
Shinae Kondoh.
Development of IgG-based antibody mimetics with a constrained target-binding peptide,
The 39th Annual Meeting of the Molecular Biology Society of Japan,
Nov. 2016.
-
Wanaporn Yimchuen,
Tetsuya Kadonosono,
Tadaomi Furuta,
Tadashi Shiozawa,
Maika Kitazawa,
Takahiro Kuchimaru,
Minoru Sakurai,
Shinae Kondoh.
Evaluation of immunoglobulin-based antibody mimetics with a constrained target-binding peptide,
The 53rd Japanese Peptide Symposium,
Oct. 2016.
-
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Ken Okamoto,
Takeshi Nishino.
ヒトには効くがバクテリアには効かない痛風薬ー酵素と阻害剤BOFとの相互作用ダイナミクス,
2016 Autumn Meeting of the Physical Society of Japan,
Sept. 2016.
-
Yuichiro Kanamori,
Tadaomi Furuta,
Minoru Sakurai.
The signal transduction mechanisms of blue-light photoreceptors AuLOV and AsLOV2 as revealed by molecular dynamics simulations,
The 16th Annual Meeting of the Protein Science Society of Japan,
June 2016.
-
Wei-Lin Hsu,
Tadaomi Furuta,
Minoru Sakurai.
Mechanism of ATP hydrolysis in Maltose Transporter as Studied by QM/MM Metadynamics Simulations,
The 16th Annual Meeting of the Protein Science Society of Japan,
June 2016.
-
Tadaomi Furuta,
Shun Nanjo,
Yoshiro Sohma,
Minoru Sakurai.
Analysis of substrate transport mechanism and mutational effects in CFTR channel by molecular dynamics simulations,
The 16th Annual Meeting of the Protein Science Society of Japan,
June 2016.
-
Tomohiro Yaita,
Tadaomi Furuta,
Minoru Sakurai.
Molecular dynamics study of the photoactivation mechanism of a BLUF protein TePixD,
The 16th Annual Meeting of the Protein Science Society of Japan,
June 2016.
-
Ryohei Yamaguchi,
takao furuki,
Tadaomi Furuta,
Minoru Sakurai.
Physiccochemical properties of non-repeat sequences in a G3LEA protein PvLEA4,
The 16th Annual Meeting of the Protein Science Society of Japan,
June 2016.
-
Kazuho Cryershinozuka,
Tadaomi Furuta,
Minoru Sakurai.
Elucidation of the mechanism of multidrug recognition by a transcriptional repressor LmrR,
The 16th Annual Meeting of the Protein Science Society of Japan,
June 2016.
-
Tadaomi Furuta.
Functional dynamics of ABC transporters explored by molecular simulations,
Osaka University IPR Seminar "Structural dynamics of membrane proteins",
May 2016.
-
Ken Okamoto,
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Takeshi Nishino.
Substrate guiding system of xanthine oxidoreductase,
BMB2015 Biochemistry and Molecular Biology,
Dec. 2015.
-
Makoto Usui,
takao furuki,
Tadaomi Furuta,
Minoru Sakurai.
Analysis of Group3LEA model peptide-protein interactions by molecular dynamics simulation,
The 53rd Annual Meeting of the Biophysical Society of Japan,
Sept. 2015.
-
Yusuke Kaneta,
Hiroshi Watanabe,
Tadaomi Furuta,
Minoru Sakurai.
Ab inito MD study on the dynamic structure of the hydrogen bond network in the active site of PYP,
The 53rd Annual Meeting of the Biophysical Society of Japan,
Sept. 2015.
-
Kaichi Yanagi,
Hiroshi C. Watanabe,
Tadaomi Furuta,
Minoru Sakurai.
Theoretical analysis of the color-tuning mechanism of mutations at Leu105 in Green-Light Absorbing Proteorhodopsin,
The 53rd Annual Meeting of the Biophysical Society of Japan,
Sept. 2015.
-
Wei-Lin Hsu,
Tadaomi Furuta,
Minoru Sakurai.
Analysis of the Free Energy Landscapes for the Open-Closing Dynamics of MalK2 Using Enhanced Sampling MD Simulation,
The 53rd Annual Meeting of the Biophysical Society of Japan,
Sept. 2015.
-
Honami Sakaizawa,
Hiroshi C. Watanabe,
Tadaomi Furuta,
Minoru Sakurai.
Statistical thermodynamic analysis of dimerization of nucleotide binding domains in an ABC transporter: fluctuation and hydration effects,
The 53rd Annual Meeting of the Biophysical Society of Japan,
Sept. 2015.
-
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Ken Okamoto,
Takeshi Nishino.
On the motion of a loop located in the entrance to the ligand-binding pocket of bacterial XOR with the inhibitor BOF,
The 53rd Annual Meeting of the Biophysical Society of Japan,
Sept. 2015.
-
Misa Banno,
Hiroshi Watanabe,
Tadaomi Furuta,
Minoru Sakurai.
Binding free energy and structural change of the G3LEA model peptide on a POPC bilayer : Computer simulations,
The 15th Annual Meeting of the Protein Science Society of Japan,
June 2015.
-
Toshihiro Hayashi,
Hiroshi Watanabe,
Tadaomi Furuta,
Minoru Sakurai.
MD simulation of effect of a constitutively activating mutation on the ligand-free G protein-coupled receptor opsin,
The 15th Annual Meeting of the Protein Science Society of Japan,
June 2015.
-
Kaichi Yanagi,
Hiroshi Watanabe,
Tadaomi Furuta,
Minoru Sakurai.
Theoretical analysis of the color-tuning mechanism of mutations at Leu105 in Green-Light Absorbing Proteorhodopsin,
The 15th Annual Meeting of the Protein Science Society of Japan,
June 2015.
-
Honami Sakaizawa,
Hiroshi Watanabe,
Tadaomi Furuta,
Minoru Sakurai.
Statistical thermodynamic analysis of dimerization process of nucleotide binding domains in an ABC transporter,
The 15th Annual Meeting of the Protein Science Society of Japan,
June 2015.
-
Hiroshi Fujisaki,
Tadaomi Furuta,
Mikito Toda.
非平衡分子動力学を用いた生体分子内のエネルギー移動の解析,
2015 Annual (70th) Meeting ot the Physical Society of Japan,
Mar. 2015.
-
Naoki Arai,
Tadaomi Furuta,
Minoru Sakurai.
Global motion of ABC transporters using nonlinear relaxation dynamics in elastic network model,
The 52nd Annual Meeting of the Biophysical Society of Japan,
Sept. 2014.
-
Tetsuo Kokubu,
Tadaomi Furuta,
Minoru Sakurai.
Analysis of the photoresponse mechanism of the LOV-HTH system using accelerated molecular dynamics simulation,
The 52nd Annual Meeting of the Biophysical Society of Japan,
Sept. 2014.
-
Kana Fuji,
Hiroshi Fujisaki,
Tadaomi Furuta,
Rumi Shiba,
Mikito Toda.
Analysis of the structural fluctuation in Staphylococcal nuclease and its Δ44-49 mutant: Insight into the enzymatic activity,
The 52nd Annual Meeting of the Biophysical Society of Japan,
Sept. 2014.
-
WeiLin Hsu,
Tadaomi Furuta,
Minoru Sakurai.
Dynamics and Structural Changes of Maltose Transporter ATPase (MalK) as studied by MD simulations,
The 52nd Annual Meeting of the Biophysical Society of Japan,
Sept. 2014.
-
Takashi Kanazawa,
Minoru Sakurai,
Tadaomi Furuta.
Molecular simulation study on the mechanism of substrate uptake in cellulase TrCel7A,
The 52nd Annual Meeting of the Biophysical Society of Japan,
Sept. 2014.
-
Nami Yoshino,
Tomohiko Hayashi,
Azuma Matsuura,
Tadaomi Furuta,
Minoru Sakurai.
Quantum chemical study of the absorption maximum of channelrhodopsin,
The 52nd Annual Meeting of the Biophysical Society of Japan,
Sept. 2014.
-
Tatsushi Nishimoto,
Tadaomi Furuta,
Minoru Sakurai.
Analysis of dynamics and structure of ABCB1 transporters from mouse and C. elegans using molecule dynamics simulations,
The 52nd Annual Meeting of the Biophysical Society of Japan,
Sept. 2014.
-
Tomohiro Yaita,
Tadaomi Furuta,
Minoru Sakurai.
Study of the photactivation mechanisms in AsLOV2 domain by using accelerated molecular dynamics simulations,
The 52nd Annual Meeting of the Biophysical Society of Japan,
Sept. 2014.
-
Tetsuro Yamaguchi,
Kentaro Yamakawa,
Takao Furuki,
Rie Hatanaka,
Hiroyuki Furusawa,
Tatsuya Niwa,
Tadaomi Furuta,
Takahiro Kikawada,
Hideki Taguchi,
Yoshio Okahata,
Minoru Sakurai.
Analysis on the interaction between G3LEA proteins and other proteins by quartz crystal microbalance,
The 52nd Annual Meeting of the Biophysical Society of Japan,
Sept. 2014.
-
Tetsuo Kokubu,
Tadaomi Furuta,
Minoru Sakurai.
Elucidation of the photoresponse mechanism of the LOV-HTH system using accelerated molecular dynamics simulation,
The 14th Annual Meeting of the Protein Science Society of Japan,
June 2014.
-
WeiLin Hsu,
Tadaomi Furuta,
Minoru Sakurai.
Dynamics and Structural Changes of Maltose Transporter ATPase (MalK) as studied by MD simulations,
The 14th Annual Meeting of the Protein Science Society of Japan,
June 2014.
-
Takashi Kanazawa,
Minoru Sakurai,
Tadaomi Furuta.
Molecular simulation study on the mechanism of substrate uptake in cellulase TrCel7A,
The 14th Annual Meeting of the Protein Science Society of Japan,
June 2014.
-
Naoki Arai,
Tadaomi Furuta,
Minoru Sakurai.
Global motion of ABC transporters using Elastic Network Model,
The 14th Annual Meeting of the Protein Science Society of Japan,
June 2014.
-
Tomohiro Yaita,
Tadaomi Furuta,
Minoru Sakurai.
Analysis of photoactivation mechanism of AsLOV2 domain using molecular dynamics simulations,
The 14th Annual Meeting of the Protein Science Society of Japan,
June 2014.
-
Tatsushi Nishimoto,
Tadaomi Furuta,
Minoru Sakurai.
Analysis of dynamic characteristics of Mouse and Caenorhabditis elegans ABCB1 using molecule dynamics simulations,
The 14th Annual Meeting of the Protein Science Society of Japan,
June 2014.
-
Hiroyuki Tamura,
Shuntaro Chiba,
Tadaomi Furuta,
Shun Sakuraba,
Nobuyuki Matubayasi,
Minoru Sakurai.
Study of the mechanism of the light-driven ion transport in halorhodopsin based on the free energy calculations,
The 51st Annual Meeting of the Biophysical Society of Japan,
Oct. 2013.
-
Mitsuhiko Odera,
Tomoka Hagiya,
Tadaomi Furuta,
Yoshiro Sohma,
Minoru Sakurai.
The effects of mutations in CFTR as studied by molecular dynamics simulations,
The 51st Annual Meeting of the Biophysical Society of Japan,
Oct. 2013.
-
Takashi Kanazawa,
Minoru Sakurai,
Tadaomi Furuta.
Mechanism of substrate uptake in cellulase TrCel7A as studied by molecular dynamics simulations,
The 51st Annual Meeting of the Biophysical Society of Japan,
Oct. 2013.
-
Tetsuo Kokubu,
Tadaomi Furuta,
Minoru Sakurai.
Study of the photoresponsive mechanism of LOV-HTH protein using μs scale molecular dynamics simulations,
The 51st Annual Meeting of the Biophysical Society of Japan,
Oct. 2013.
-
Tomohiko Hayashi,
Tomoka Hagiya,
Shuntaro Chiba,
Tadaomi Furuta,
Norio Yoshida,
Minoru Sakurai.
Theoretical analyses of the nucleotide-binding domain dimerization of ABC transporters: roles of ATP and water,
The 51st Annual Meeting of the Biophysical Society of Japan,
Oct. 2013.
-
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Ken Okamoto,
Takeshi Nishino.
Mutation studies on the mammalian and the baterial XORs with inhibitors,
The 51st Annual Meeting of the Biophysical Society of Japan,
Oct. 2013.
-
中村彰彦,
塚田剛士,
石田卓也,
五十嵐圭日子,
鮫島正浩,
Tadaomi Furuta,
Sanna Auer,
Anu Koivula.
糸状菌由来糖質加水分解酵素ファミリー7セロビオヒドロラーゼの機能解析,
第27回セルラーゼ研究会,
July 2013.
-
Yukiko Sato,
Tadaomi Furuta,
Minoru Sakurai.
Structural changes induced by ATP and/or substrate binding in ABC transporter TM287/288 using molecular dynamics,
The 13rd Annual Meeting of the Protein Science Society of Japan,
June 2013.
-
Tetsuo Kokubu,
Tadaomi Furuta,
Minoru Sakurai.
Analysis of the photoresponse mechanism of the LOV-HTH system using molecular dynamics simulation,
The 13rd Annual Meeting of the Protein Science Society of Japan,
June 2013.
-
Takashi Kanazawa,
Minoru Sakurai,
Tadaomi Furuta.
Mechanism of substrate uptake in cellulase TrCel7A as studied by molecular dynamics simulations,
The 13rd Annual Meeting of the Protein Science Society of Japan,
June 2013.
-
Ken Okamoto,
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Takeshi Nishino.
抗痛風薬フェブキソスタットとキサンチン酸化還元酵素との動的相互作用の解析,
第46回日本痛風・核酸代謝学会総会,
Feb. 2013.
-
Ken Okamoto,
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Takeshi Nishino.
抗痛風薬フェブキソスタットとキサンチン酸化還元酵素との動的相互作用の解析,
The 85th Annual Meeting of the Japanese Biochemical Society,
Dec. 2012.
-
Wei-Lin Hsu,
Yurika Watanabe,
Tadaomi Furuta,
Minoru Sakurai.
Dynamics and Structural Changes of ABCB1 transporter induced by binding of substrates and inhibitors,
The 50th Annual Meeting of the Biophysical Society of Japan,
Sept. 2012.
-
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Ken Okamoto,
Takeshi Nishino.
Molecular dynamics simulations and binding free energy analysis of xanthine oxidoreductase-ligand complexes,
The 50th Annual Meeting of the Biophysical Society of Japan,
Sept. 2012.
-
Tomoka Hagiya,
Tadaomi Furuta,
Shuntaro Chiba,
Yoshiro Sohma,
Minoru Sakurai.
ATP-Binding induced conformational change in CFTR as studied by MD simulation,
The 50th Annual Meeting of the Biophysical Society of Japan,
Sept. 2012.
-
Yusuke Kaneta,
Shuntaro Chiba,
Tadaomi Furuta,
Minoru Sakurai.
Calculation of the binding free energy of ATP to the nucleotide binding domain of an ABC transporter,
The 50th Annual Meeting of the Biophysical Society of Japan,
Sept. 2012.
-
Tomoka Hagiya,
Shuntaro Chiba,
Tadaomi Furuta,
Yoshiro Sohma,
Minoru Sakurai.
ATP-Binding induced NBD dimerization in CFTR as studied by MD simulation,
The 12th Annual Meeting of the Protein Science Society of Japan,
June 2012.
-
Tadaomi Furuta,
Tomohiro Yamaguchi,
Hiroaki Kato,
Minoru Sakurai.
Structural effects of coupling helix mutations in the ABC transporterMsbA by molecular dynamics simulation,
The 12th Annual Meeting of the Protein Science Society of Japan,
June 2012.
-
Nami Yoshino,
Azuma Matsuura,
Hiroyuki Sato,
Tadaomi Furuta,
Tomohiko Hayashi,
Minoru Sakurai.
Analyses of the spectral tuning mechanism of Photoactive Yellow Protein based on quantum chemical calculations,
The 12th Annual Meeting of the Protein Science Society of Japan,
June 2012.
-
Shuntaro Chiba,
Tadaomi Furuta,
Minoru Sakurai.
To improve the reproducibility of protein-ligand binding free energies calculated by the MM-PB/SA method,
The 12th Annual Meeting of the Protein Science Society of Japan,
June 2012.
-
Mitsuhiko Odera,
Tomoka Hagiya,
Tadaomi Furuta,
Yoshiro Sohma,
Minoru Sakurai.
Analysis of the ATP-driven gating cycle in an ABC transporter CFTR channel,
The 12th Annual Meeting of the Protein Science Society of Japan,
June 2012.
-
Yusuke Kaneta,
Shuntaro Chiba,
Tadaomi Furuta,
Minoru Sakurai.
Calculation of the binding free energy of ATP to the nucleotide binding domain of a ABC transporter,
The 12th Annual Meeting of the Protein Science Society of Japan,
June 2012.
-
Akihiko Nakamura,
Kiyohiko Igarashi,
Tadaomi Furuta,
Jerry Ståhlberg,
Anu Koivula,
Merja Penttila,
Masahiro Samejima.
Tryptophan 40 residue of Trichoderma reesei cellobiohydrolase I is necessary for degradation of crystalline cellulos,
Annual Meeting of Japan Society for Bioscience, Biotechnology, and Agrochemistry 2012,
Mar. 2012.
-
Tomoka Hagiya,
Tadaomi Furuta,
Yoshiro Sohma,
Minoru Sakurai.
ATP-binding induced conformational changes in CFTR of the inward facing state using a Simulation Study,
The 34th Annual Meeting of the Molecular Biology Society of Japan,
Dec. 2011.
-
中村彰彦,
五十嵐圭日子,
Tadaomi Furuta,
Jerry Ståhlberg,
Anu Koivula,
Merja Penttila,
鮫島正浩.
Trichoderma reesi由来Cel7Aアクティブサイトにおけるトリプトファン残基の役割,
第25回セルラーゼ研究会,
Oct. 2011.
-
Hiroto Kikuchi,
Hiroshi Fujisaki,
Tadaomi Furuta,
Ken Okamoto,
Takeshi Nishino.
キサンチン酸化還元酵素に対するフェブキソスタットの阻害作用,
2011 Autumn Meeting of the Physical Society of Japan,
Sept. 2011.
Other Publication
-
Yuki Ohmuro-Matsuyama,
Tadaomi Furuta.
Development and Improvement of the Smallest Luciferase, picALuc,
Denki Kagaku,
vol. 92,
no. 2,
pp. 123-128,
June 2024.
-
Shigetaka Nishiguchi,
Tadaomi Furuta,
Takayuki Uchihashi.
Dimerization Processes of Cell-cell Adhesion Molecule Cadherin Revealed by High-speed Atomic Force Microscopy,
Seibutsu Butsuri,
vol. 63,
no. 2,
pp. 104-106,
Apr. 2023.
-
Tadaomi Furuta.
Structural dynamics of ABC transporters: molecular simulation studies,
Biochem. Soc. Trans.,
vol. 49,
no. 1,
pp. 405-414,
Feb. 2021.
-
Akihiko Nakamura,
Kei-ichi Okazaki,
Tadaomi Furuta,
Minoru Sakurai,
Jun Ando,
Ryota Iino.
Crystalline chitin hydrolase is a burnt-bridge Brownian motor,
Biophys. Physicobiol.,
vol. 17,
pp. 51-58,
July 2020.
-
Akihiko Nakamura,
Kei-ichi Okazaki,
Tadaomi Furuta,
Minoru Sakurai,
Ryota Iino.
Moving mechanism of chitinase A form Serratia marcescens,
Bull. Appl. Glycosci.,
vol. 10,
no. 2,
pp. 89-95,
May 2020.
-
Akihiko Nakamura,
Kei-ichi Okazaki,
Tadaomi Furuta,
Minoru Sakurai,
Ryota Iino.
Chitinase moves on and degradates crystalline chitine with Brownian motion,
Seibutsu Butsuri,
vol. 59,
no. 6,
pp. 330-333,
Nov. 2019.
-
Tadaomi Furuta,
Minoru Sakurai.
Molecular simulations of membrane transporters,
The Cell,
vol. 51,
no. 7,
pp. 28-29,
May 2019.
Official location
-
Tadaomi Furuta,
Tomohiro Yamaguchi,
Hiroaki Kato,
Minoru Sakurai.
Mechanism for the transport of ABC transporters by experimental and simulation studies,
Seibutsu Butsuri,
vol. 56,
no. 1,
pp. 005-008,
Jan. 2016.
-
Hiroshi Fujisaki,
Tadaomi Furuta,
Ken Okamoto,
Hiroto Kukuchi.
Combined biophysical and biochemical study of enzyme effects: binding mechanism of an inhibitor febuxostat with xanthine oxidoreductase,
Nihon Ika Daigaku Igakkai Zasshi,
vol. 8,
no. 3,
pp. 222-227,
Aug. 2012.
Official location
Degree
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