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村上聡 研究業績一覧 (140件)
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論文
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村上聡,
岡田有意,
山下栄樹.
RND型多剤排出トランスポーターの構造機能研究~輸送素過程の考察,
生物物理,
Vol. 64,
No. 4,
p. 185-189,
July 2024.
公式リンク
-
Kazuyuki Tao,
Shin-ichiro Narita,
Ui Okada,
Satoshi Murakami,
Hajime Tokuda.
Dissection of an ABC transporter LolCDE function analyzed by photo-crosslinking,
J BIOCHEM,
Volume 175,
Issue 4,
Page 427-437,
Mar. 2024.
公式リンク
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Taichi Chisuga,
satoshi murakami,
Akimasa Miyanaga,
Fumitaka Kudo,
Tadashi Eguchi.
Structure-Based Analysis of Transient Interactions between Ketosynthase-like Decarboxylase and Acyl Carrier Protein in a Loading Module of Modular Polyketide Synthase,
ACS Chem. Biol.,
Vol. 18,
No. 6,
pp. 1398-1404,
May 2023.
-
Ui Okada,
Satoshi Murakami.
Structural and functional characteristics of the tripartite ABC transporter,
Microbiology,
Nov. 2022.
公式リンク
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Sagar Raturi,
Asha V. Nair,
Keiko Shinoda,
Himansha Singh,
Boyan Bai,
Satoshi Murakami,
Hideaki Fujitani,
Hendrik W. van Veen.
Engineered MATE multidrug transporters reveal two functionally distinct ion-coupling pathways in NorM from Vibrio cholerae,
Communications Biology,
Dec. 2021.
公式リンク
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Nagakumar Bharatham,
Purnendu Bhowmik,
Maho Aoki,
Ui Okada,
Sreevalli Sharma,
Eiki Yamashita,
Anirudh P. Shanbhag,
Sreenath Rajagopal,
Teby Thomas,
Maitrayee Sarma,
Riya Narjari,
Savitha Nagaraj,
Vasanthi Ramachandran,
Nainesh Katagihallimath,
Santanu Datta,
satoshi murakami.
Structure and function relationship of OqxB efflux pump from Klebsiella pneumoniae,
Nature Communications,
Vol. 12,
No. 1,
Dec. 2021.
公式リンク
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Satoshi Murakami,
Ui Okada,
Hendrik W. Veen.
Tripartite transporters as mechanotransmitters in periplasmic alternating‐access mechanisms,
FEBS Letters,
Vol. 594,
No. 23,
pp. 3908-3919,
Dec. 2020.
公式リンク
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Christoph Thomas,
Stephen G. Aller,
Konstantinos Beis,
Elisabeth P. Carpenter,
Geoffrey Chang,
satoshi murakami,
Robert Tampé.
Structural and functional diversity calls for a new classification of ABC transporters,
FEBS Letters,
Sept. 2020.
公式リンク
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岡田有意,
村上聡.
三者複合体形成型ABCトランスポーターMacBの構造解析,
ファルマシア,
56,
6,
499-503,
June 2020.
-
Kentaro Akiyama,
Kumiko Kondo,
Kosuke Inabe,
satoshi murakami,
Ken-Ichi Wakabayashi,
TORU HISABORI.
The β-hairpin region of cyanobacterial F1-ATPase γ subunit plays a regulatory role in the enzyme activity.,
Biochemical Journal,
June 2019.
-
Tomonari Horikawa,
Li-Wei Hung,
Heung-Bok Kim,
David Shaya,
Chang-Yub Kim,
Thomas C. Terwilliger,
Eiki Yamashita,
Maho Aoki,
Ui Okada,
Satoshi Murakami.
BpeB, a major resistance-nodulation-cell division transporter from Burkholderia cenocepacia: construct design, crystallization and preliminary structural analysis,
Acta Crystallographica Section F Structural Biology Communications,
Vol. 74,
No. 11,
pp. 710-716,
Nov. 2018.
公式リンク
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Murakami, Satoshi,
Kondo, Kumiko,
Katayama, Shinya,
Hara, Satoshi,
Sunamura, Ei-ichiro,
Yamashita, Eiki,
Groth, Georg,
Hisabori, Toru,
satoshi murakami.
Structure of the gamma-epsilon complex of cyanobacterial F-1-ATPase reveals a suppression mechanism of the gamma subunit on ATP hydrolysis in phototrophs,
Biochemical Journal,
Vol. 475,
pp. 2925-2939,
Sept. 2018.
公式リンク
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Kobayashi, Naritaka,
Maruyama, Mihoko,
Mori, Yoichiro,
Fukukita, Suguru,
Adachi, Hiroaki,
Takano, Kazufumi,
Murakami, Satoshi,
Matsumura, Hiroyoshi,
Inoue, Tsuyoshi,
Yoshimura, Masashi,
Nakabayashi, Seiichiro,
Mori, Yusuke,
Yoshikawa, Hiroshi Y.,
satoshi murakami.
Atomic-Scale Imaging of Surface and Hydration Structures of Stable and Metastable Acetaminophen Crystals by Frequency Modulation Atomic Force Microscopy,
Journal of Physical Chemistry C,
Vol. 122,
No. 38,
pp. 21983-21990,
Sept. 2018.
公式リンク
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Agboh, Kelvin,
Lau, Calvin H. F.,
Khoo, Yvonne S. K.,
Singh, Himansha,
Raturi, Sagar,
Nair, Asha, V,
Howard, Julie,
Chiapello, Marco,
Feret, Renata,
Deery, Michael J.,
Murakami, Satoshi,
van Veen, Hendrik W.,
satoshi murakami.
Powering the ABC multidrug exporter LmrA: How nucleotides embrace the ion-motive force,
Science Advances,
Vol. 4,
No. 9,
Sept. 2018.
公式リンク
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Fujimoto, Riki,
Maruyama, Mihoko,
Mori, Yoichiro,
Okada, Shino,
Adachi, Hiroaki,
Yoshikawa, Hiroshi Y.,
Takano, Kazufumi,
Murakami, Satoshi,
Matsumura, Hiroyoshi,
Inoue, Tsuyoshi,
Imanishi, Masayuki,
Tsukamoto, Katsuo,
Yoshimura, Masashi,
Mori, Yusuke,
satoshi murakami.
Growth of high-quality metastable crystal of acetaminophen using solution-mediated phase transformation at low supersaturation,
Journal of Crystal Growth,
Vol. 502,
pp. 76-82,
Sept. 2018.
公式リンク
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Matsunaga, Yasuhiro,
Yamane, Tsutomu,
Terada, Tohru,
Moritsugu, Kei,
Fujisaki, Hiroshi,
Murakami, Satoshi,
Ikeguchi, Mitsunori,
Kidera, Akinori,
satoshi murakami.
Energetics and conformational pathways of functional rotation in the multidrug transporter AcrB,
Elife,
Vol. 7,
Mar. 2018.
公式リンク
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Nii, Kosuke,
Maruyama, Mihoko,
Okada, Shino,
Adachi, Hiroaki,
Takano, Kazufumi,
Murakami, Satoshi,
Yoshikawa, Hiroshi Y.,
Matsumura, Hiroyoshi,
Inoue, Tsuyoshi,
Imanishi, Masayuki,
Tsukamoto, Katsuo,
Yoshimura, Masashi,
Mori, Yusuke,
satoshi murakami.
Improvement of metastable crystal of acetaminophen via control of crystal growth rate,
Applied Physics Express,
Vol. 11,
No. 3,
Feb. 2018.
公式リンク
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Fitzpatrick, Anthony W P,
Llabres, Salome,
Neuberger, Arthur,
Blaza, James N,
Bai, Xiao-Chen,
Okada, Ui,
satoshi murakami,
van Veen, Hendrik W,
Zachariae, Ulrich,
Scheres, Sjors H W,
Luisi, Ben F,
Du, Dijun.
Structure of the MacAB-TolC ABC-type tripartite multidrug efflux pump.,
Nature microbiology,
Vol. 2,
pp. 17070,
May 2017.
公式リンク
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Mori, Yoichiro,
Maruyama, Mihoko,
Takahashi, Yoshinori,
Yoshikawa, Hiroshi Y.,
Okada, Shino,
Adachi, Hiroaki,
Sugiyama, Shigeru,
Takano, Kazufumi,
Murakami, Satoshi,
Matsumura, Hiroyoshi,
Inoue, Tsuyoshi,
Yoshimura, Masashi,
Mori, Yusuke,
satoshi murakami.
Crystallization of acetaminophen form II by plastic-ball-assisted ultrasonic irradiation,
Applied Physics Express,
Vol. 10,
No. 2,
Jan. 2017.
公式リンク
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Mori, Yoichiro,
Maruyama, Mihoko,
Takahashi, Yoshinori,
Yoshikawa, Hiroshi Y.,
Okada, Shino,
Adachi, Hiroaki,
Sugiyama, Shigeru,
Takano, Kazufumi,
satoshi murakami,
Matsumura, Hiroyoshi,
Inoue, Tsuyoshi,
Yoshimura, Masashi,
Mori, Yusuke.
Metastable crystal growth of acetaminophen using solution-mediated phase transformation,
Applied Physics Express,
Vol. 10,
No. 1,
pp. 015501,
Dec. 2016.
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Matsuoka, M.,
Kakinouchi, K.,
Adachi, H.,
Maruyama, M.,
Sugiyama, S.,
Sano, S.,
Yoshikawa, H. Y.,
Takahashi, Y.,
Yoshimura, M.,
Matsumura, H.,
satoshi murakami,
Inoue, T.,
Mori, Y.,
Takano, K..
Protein crystallization with paper,
Japanese Journal of Applied Physics,
Vol. 55,
No. 5,
2016.
公式リンク
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Tominaga, Yusuke,
Maruyama, Mihoko,
Yoshimura, Masashi,
Koizumi, Haruhiko,
Tachibana, Masaru,
Sugiyama, Shigeru,
Adachi, Hiroaki,
Tsukamoto, Katsuo,
Matsumura, Hiroyoshi,
Takano, Kazufumi,
satoshi murakami,
Inoue, Tsuyoshi,
Yoshikawa, Hiroshi Y.,
Mori, Yusuke.
Promotion of protein crystal growth by actively switching crystal growth mode via femtosecond laser ablation,
Nature Photonics,
Vol. 10,
No. 11,
pp. 723-+,
2016.
公式リンク
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Maruyama, Mihoko,
Hayashi, Yuki,
Yoshikawa, Hiroshi Y.,
Okada, Shino,
Koizumi, Haruhiko,
Tachibana, Masaru,
Sugiyama, Shigeru,
Adachi, Hiroaki,
Matsumura, Hiroyoshi,
Inoue, Tsuyoshi,
Takano, Kazufumi,
Murakami, Satoshi,
Yoshimura, Masashi,
Mori, Yusuke,
satoshi murakami.
A crystallization technique for obtaining large protein crystals with increased mechanical stability using agarose gel combined with a stirring technique,
Journal of Crystal Growth,
Vol. 452,
pp. 172-178,
2016.
公式リンク
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Matsuoka, M.,
Kakinouchi, K.,
Adachi, H.,
Maruyama, M.,
Sugiyama, S.,
Nakabayashi, I.,
Tsuchikura, H.,
Kuwahara, A.,
Sano, S.,
Yoshikawa, H. Y.,
Takahashi, Y.,
Yoshimura, M.,
Matsumura, H.,
satoshi murakami,
Inoue, T.,
Mori, Y.,
Takano, K..
Growth of high-strength protein crystals with nanofibers,
Applied Physics Express,
Vol. 9,
No. 3,
2016.
公式リンク
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Sugiyama, S.,
Ishikawa, S.,
Tomitori, H.,
Niiyama, M.,
Hirose, M.,
Miyazaki, Y.,
Higashi, K.,
Murata, M.,
Adachi, H.,
Takano, K.,
satoshi murakami,
Inoue, T.,
Mori, Y.,
Kashiwagi, K.,
Igarashi, K.,
Matsumura, H..
Molecular mechanism underlying promiscuous polyamine recognition by spermidine acetyltransferase,
International Journal of Biochemistry & Cell Biology,
Vol. 76,
pp. 87-97,
2016.
公式リンク
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Ikeda, K.,
Maruyama, M.,
Takahashi, Y.,
Mori, Y.,
Yoshikawa, H. Y.,
Okada, S.,
Adachi, H.,
Sugiyama, S.,
Takano, K.,
satoshi murakami,
Matsumura, H.,
Inoue, T.,
Yoshimura, M..
Selective crystallization of the metastable phase of indomethacin at the interface of liquid/air bubble induced by femtosecond laser irradiation,
Applied Physics Express,
Vol. 8,
No. 4,
2015.
公式リンク
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Hayashi, Y.,
Maruyama, M.,
Yoshimura, M.,
Okada, S.,
Yoshikawa, H. Y.,
Sugiyama, S.,
Adachi, H.,
Matsumura, H.,
Inoue, T.,
Takano, K.,
satoshi murakami,
Mori, Y..
Spiral Growth Can Enhance Both the Normal Growth Rate and Quality of Tetragonal Lysozyme Crystals Grown under a Forced Solution Flow,
Crystal Growth & Design,
Vol. 15,
No. 5,
pp. 2137-2143,
2015.
公式リンク
-
Du, D.,
van Veen, H. W.,
satoshi murakami,
Pos, K. M.,
Luisi, B. F..
Structure, mechanism and cooperation of bacterial multidrug transporters,
Curr Opin Struct Biol,
Vol. 33,
pp. 76-91,
2015.
-
Matsuoka, S.,
Sugiyama, S.,
Matsuoka, D.,
Hirose, M.,
Lethu, S.,
Ano, H.,
Hara, T.,
Ichihara, O.,
Kimura, S. R.,
satoshi murakami,
Ishida, H.,
Mizohata, E.,
Inoue, T.,
Murata, M..
Water-mediated recognition of simple alkyl chains by heart-type fatty-acid-binding protein,
Angew Chem Int Ed Engl,
Vol. 54,
No. 5,
pp. 1508-11,
2015.
-
Sugiyama, S.,
Shimizu, N.,
Kakinouchi, K.,
Hiraoka, O.,
Matsumura, H.,
Yoshikawa, H. Y.,
Takahashi, Y.,
Maruyama, M.,
Yoshimura, M.,
Adachi, H.,
Takano, K.,
satoshi murakami,
Inoue, T.,
Murata, M.,
Mori, Y..
Development of protein seed crystals reinforced with high-strength hydrogels,
Crystengcomm,
Vol. 17,
No. 42,
pp. 8064-8071,
2015.
公式リンク
-
Maruyama, N.,
Goshi, T.,
Sugiyama, S.,
Niiyama, M.,
Adachi, H.,
Takano, K.,
satoshi murakami,
Inoue, T.,
Mori, Y.,
Matsumura, H.,
Mikami, B..
Preliminary X-ray analysis of the binding domain of the soybean vacuolar sorting receptor complexed with a sorting determinant of a seed storage protein,
Acta Crystallogr F Struct Biol Commun,
Vol. 71,
No. Pt 2,
pp. 132-5,
2015.
-
Mori, Y.,
Maruyama, M.,
Takahashi, Y.,
Ikeda, K.,
Fukukita, S.,
Yoshikawa, H. Y.,
Okada, S.,
Adachi, H.,
Sugiyama, S.,
Takano, K.,
satoshi murakami,
Matsumura, H.,
Inoue, T.,
Yoshimura, M..
Selective crystallization of metastable phase of acetaminophen by ultrasonic irradiation,
Applied Physics Express,
Vol. 8,
No. 6,
2015.
公式リンク
-
satoshi murakami,
山根, 努,
池口, 満徳,
高田, 彰二.
計算科学と実験科学の組み合わせにより明らかになった多剤排出トランスポーターAcrBの分子メカニズム,
生物物理,
Vol. 55,
No. 1,
pp. 027-030,
2015.
-
Aoki, Y.,
Maruyama, M.,
Takahashi, Y.,
Yoshimura, M.,
Yoshikawa, H. Y.,
Sugiyama, S.,
Adachi, H.,
Takano, K.,
satoshi murakami,
Matsumura, H.,
Inoue, T.,
Mori, Y..
A new practical technique for high quality protein crystallization with the solution stirring technique at the interface between high-concentrated hydrogel and solution,
Japanese Journal of Applied Physics,
Vol. 53,
No. 6,
2014.
公式リンク
-
Sugiyama, S.,
Kashiwagi, K.,
Kakinouchi, K.,
Tomitori, H.,
Kanai, K.,
Murata, M.,
Adachi, H.,
Matsumura, H.,
Takano, K.,
satoshi murakami,
Inoue, T.,
Mori, Y.,
Igarashi, K..
Crystallization and preliminary crystallographic studies of PotA, a membrane-associated ATPase of the spermidine-preferential uptake system in Thermotoga maritima,
Acta Crystallographica Section F-Structural Biology Communications,
Vol. 70,
pp. 738-741,
2014.
公式リンク
-
Yoshikawa, H. Y.,
Murai, R.,
Adachi, H.,
Sugiyama, S.,
Maruyama, M.,
Takahashi, Y.,
Takano, K.,
Matsumura, H.,
Inoue, T.,
satoshi murakami,
Masuhara, H.,
Mori, Y..
Laser ablation for protein crystal nucleation and seeding,
Chem Soc Rev,
Vol. 43,
No. 7,
pp. 2147-58,
2014.
-
Kobayashi, N.,
Tamura, N.,
van Veen, H. W.,
Yamaguchi, A.,
satoshi murakami.
beta-Lactam selectivity of multidrug transporters AcrB and AcrD resides in the proximal binding pocket,
J Biol Chem,
Vol. 289,
No. 15,
pp. 10680-90,
2014.
-
Ruggerone, P.,
satoshi murakami,
Pos, K. M.,
Vargiu, A. V..
RND efflux pumps: structural information translated into function and inhibition mechanisms,
Curr Top Med Chem,
Vol. 13,
No. 24,
pp. 3079-100,
2013.
-
Hirose, M.,
Sugiyama, S.,
Ishida, H.,
Niiyama, M.,
Matsuoka, D.,
Hara, T.,
Mizohata, E.,
satoshi murakami,
Inoue, T.,
Matsuoka, S.,
Murata, M..
Structure of the human-heart fatty-acid-binding protein 3 in complex with the fluorescent probe 1-anilinonaphthalene-8-sulphonic acid,
J Synchrotron Radiat,
Vol. 20,
No. Pt 6,
pp. 923-8,
2013.
-
Hurd, T. W.,
Otto, E. A.,
Mishima, E.,
Gee, H. Y.,
Inoue, H.,
Inazu, M.,
Yamada, H.,
Halbritter, J.,
Seki, G.,
Konishi, M.,
Zhou, W.,
Yamane, T.,
satoshi murakami,
Caridi, G.,
Ghiggeri, G.,
Abe, T.,
Hildebrandt, F..
Mutation of the Mg2+ transporter SLC41A1 results in a nephronophthisis-like phenotype,
J Am Soc Nephrol,
Vol. 24,
No. 6,
pp. 967-77,
2013.
-
Yamane, T.,
satoshi murakami,
Ikeguchi, M..
Functional rotation induced by alternating protonation states in the multidrug transporter AcrB: all-atom molecular dynamics simulations,
Biochemistry,
Vol. 52,
No. 43,
pp. 7648-58,
2013.
-
Niiyama, M.,
Sugiyama, S.,
Hirose, M.,
Ishikawa, S.,
Tomitori, H.,
Higashi, K.,
Yamashita, T.,
Adachi, H.,
Takano, K.,
satoshi murakami,
Murata, M.,
Inoue, T.,
Mori, Y.,
Kashiwagi, K.,
Matsumura, H.,
Igarashi, K..
Expression, purification, crystallization and preliminary crystallographic analysis of spermidine acetyltransferase from Escherichia coli,
Acta Crystallographica Section F-Structural Biology and Crystallization Communications,
Vol. 69,
pp. 884-887,
2013.
公式リンク
-
Nakayama, S.,
Yoshikawa, H. Y.,
Murai, R.,
Kurata, M.,
Maruyama, M.,
Sugiyama, S.,
Aoki, Y.,
Takahashi, Y.,
Yoshimura, M.,
Nakabayashi, S.,
Adachi, H.,
Matsumura, H.,
Inoue, T.,
Takano, K.,
satoshi murakami,
Mori, Y..
Effect of Gel-Solution Interface on Femtosecond Laser-Induced Nucleation of Protein,
Crystal Growth & Design,
Vol. 13,
No. 4,
pp. 1491-1496,
2013.
公式リンク
-
Yao, X. Q.,
Kimura, N.,
satoshi murakami,
Takada, S..
Drug uptake pathways of multidrug transporter AcrB studied by molecular simulations and site-directed mutagenesis experiments,
J Am Chem Soc,
Vol. 135,
No. 20,
pp. 7474-85,
2013.
-
Hung, L. W.,
Kim, H. B.,
satoshi murakami,
Gupta, G.,
Kim, C. Y.,
Terwilliger, T. C..
Crystal structure of AcrB complexed with linezolid at 3.5 A resolution,
J Struct Funct Genomics,
Vol. 14,
No. 2,
pp. 71-5,
2013.
-
Sugiyama, S.,
Shimizu, N.,
Sazaki, G.,
Hirose, M.,
Takahashi, Y.,
Maruyama, M.,
Matsumura, H.,
Adachi, H.,
Takano, K.,
satoshi murakami,
Inoue, T.,
Mori, Y..
A Novel Approach for Protein Crystallization by a Synthetic Hydrogel with Thermoreversible Gelation Polymer,
Crystal Growth & Design,
Vol. 13,
No. 5,
pp. 1899-1904,
2013.
公式リンク
-
丸山, 美帆子,
中村, 真利子,
佐崎, 元,
高橋, 義典,
吉村, 政志,
吉川, 洋史,
杉山, 成,
安達, 宏昭,
松村, 浩由,
井上, 豪,
高野, 和文,
satoshi murakami,
森, 勇介.
溶液流れ下におけるタンパク質の結晶成長(<特集>タンパク質結晶成長の最前線),
日本結晶成長学会誌,
Vol. 40,
No. 2,
pp. 72-82,
2013.
-
Sugiyama, S.,
Maruyama, M.,
Sazaki, G.,
Hirose, M.,
Adachi, H.,
Takano, K.,
satoshi murakami,
Inoue, T.,
Mori, Y.,
Matsumura, H..
Growth of Protein Crystals in Hydrogels Prevents Osmotic Shock,
Journal of the American Chemical Society,
Vol. 134,
No. 13,
pp. 5786-5789,
2012.
公式リンク
-
Maruyama, M.,
Kawahara, H.,
Sazaki, G.,
Maki, S.,
Takahashi, Y.,
Yoshikawa, H. Y.,
Sugiyama, S.,
Adachi, H.,
Takano, K.,
Matsumura, H.,
Inoue, T.,
satoshi murakami,
Mori, Y..
Effects of a Forced Solution Flow on the Step Advancement on {110} Faces of Tetragonal Lysozyme Crystals: Direct Visualization of Individual Steps under a Forced Solution Flow,
Crystal Growth & Design,
Vol. 12,
No. 6,
pp. 2856-2863,
2012.
公式リンク
-
杉山, 成,
廣瀬, 未果,
佐崎, 元,
安達, 宏昭,
高野, 和文,
satoshi murakami,
松村, 浩由,
丸山, 美帆子,
井上, 豪,
森, 勇介.
固相ハイドロゲル中でのタンパク質結晶化,
日本結晶学会誌,
Vol. 54,
No. 5,
pp. 300-303,
2012.
-
Yoshikawa, H. Y.,
Hosokawa, Y.,
Murai, R.,
Sazaki, G.,
Kitatani, T.,
Adachi, H.,
Inoue, T.,
Matsumura, H.,
Takano, K.,
satoshi murakami,
Nakabayashi, S.,
Mori, Y.,
Masuhara, H..
Spatially Precise, Soft Microseeding of Single Protein Crystals by Femtosecond Laser Ablation,
Crystal Growth & Design,
Vol. 12,
No. 9,
pp. 4334-4339,
2012.
公式リンク
-
Murai, R.,
Yoshikawa, H. Y.,
Hasenaka, H.,
Takahashi, Y.,
Maruyama, M.,
Sugiyama, S.,
Adachi, H.,
Takano, K.,
Matsumura, H.,
satoshi murakami,
Inoue, T.,
Mori, Y..
Influence of energy and wavelength on femtosecond laser-induced nucleation of protein,
Chemical Physics Letters,
Vol. 510,
No. 1-3,
pp. 139-142,
2011.
公式リンク
-
Matsumura, H.,
Kakiniuchi, K.,
Nakamura, T.,
Sugiyama, S.,
Maruyama, M.,
Adachi, H.,
Takano, K.,
satoshi murakami,
Inoue, T.,
Mori, Y..
Growth of Protein Crystals by Syringe-Type Top-Seeded Solution Growth,
Crystal Growth & Design,
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satoshi murakami,
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森, 勇介.
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Approach for growth of high-quality and large protein crystals,
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Xiang, H. Y.,
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Crystallization and preliminary X-ray crystallographic analysis of a helicase-like domain from a tomato mosaic virus replication protein,
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Sugiyama, S.,
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Japanese Journal of Applied Physics,
Vol. 50,
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Iefuji, N.,
Murai, R.,
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Adachi, H.,
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satoshi murakami,
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satoshi murakami.
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福西, 快文,
中村, 春木,
木下, 誉富,
仲西, 功,
奥野, 恭史,
南方, 聖司,
三上, 義明,
佐久間, 俊広,
北島, 正人,
福岡, 良忠,
高田, 俊和,
坂田, 恒昭.
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satoshi murakami,
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Molecular resolution investigation of tetragonal lysozyme (110) face in liquid by frequency-modulation atomic force microscopy,
Journal of Vacuum Science & Technology B,
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Kakinouchi, K.,
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Growth of large protein crystals by a large-scale hanging-drop method,
Journal of Applied Crystallography,
Vol. 43,
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Maruyama, Mihoko,
Shimizu, Noriko,
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Estimated effects of silicone glue on protein crystal growth,
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Murai, R.,
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Enhancement of femtosecond laser-induced nucleation of protein in a gel solution,
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Crystal Growth Procedure of HIV-1 Protease-Inhibitor KNI-272 Complex for Neutron Structural Analysis at 1.9 angstrom Resolution,
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2010.
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Conformational plasticity of RNA for target recognition as revealed by the 2.15 A crystal structure of a human IgG-aptamer complex,
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Kishimoto-Okada, A.,
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Comparison of the envelope architecture of E. coli using two methods: CEMOVIS and cryo-electron tomography,
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Growth of Large Protein Crystals by Top-Seeded Solution Growth Together with the Floating and Solution-Stirring Technique,
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Hasenaka, H.,
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Sugiyama, S.,
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Tanabe, K.,
Hirose, M.,
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Takahashi, Y.,
Adachi, H.,
Takano, K.,
satoshi murakami,
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Applied Physics Express,
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Matsumura, H.,
Adachi, M.,
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Hayashi, Y.,
Kimura, T.,
Kiso, Y.,
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Maki, S.,
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satoshi murakami,
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Crystallization and preliminary neutron diffraction studies of HIV-1 protease cocrystallized with inhibitor KNI-272,
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Yoshikawa, H. Y.,
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Crystallization and preliminary X-ray crystallographic analysis of Ca2+-free primary Ca2+-sensor of Na+/Ca2+ exchanger,
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satoshi murakami.
Multidrug efflux transporter, AcrB--the pumping mechanism,
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Woebking, B.,
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Federici, L.,
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Functional role of transmembrane helix 6 in drug binding and transport by the ABC transporter MsbA,
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Effect of solution flow produced by rotary shaker on protein crystallization,
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Sugiyama, S.,
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Takano, K.,
satoshi murakami,
Inoue, T.,
Mori, Y.,
Nakamura, Y.,
Matsumura, H..
Crystallization and preliminary X-ray diffraction studies of an RNA aptamer in complex with the human IgG Fc fragment,
Acta Crystallogr Sect F Struct Biol Cryst Commun,
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satoshi murakami.
[Molecular mechanism of multi-drug resistance],
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安達, 宏昭,
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松村, 浩由,
森, 勇介,
福西, 快文,
中村, 春木,
木下, 誉富,
仲西, 功,
奥野, 恭史,
南方, 聖司,
下条, 真司,
坂田, 恒昭.
膜タンパク質の結晶化技術の新展開及び創薬バリューチェインの紹介(誌上シンポジウム),
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satoshi murakami.
現代医学の焦点(302)多剤耐性の仕組み,
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Okada, S.,
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Protein crystallization in a 100 nl solution with new stirring equipment,
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Kitatani, T.,
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New technique of manipulating a protein crystal using adhesive material,
Applied Physics Express,
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Kitatani, T.,
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Inoue, T.,
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Evaluation and Improvement of a Technique to Manipulate Protein Crystals in Solution,
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Inoue, T.,
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[New progress in crystallization technology of membrane protein and introduction of pharamaceutical innovation value chain],
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生物物理,
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Femtosecond laser-induced cleaving of protein crystal in water solution,
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Mori, Y.,
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Maki, S.,
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Development of protein crystallization and processing: Femtosecond laser, all solid-state 193 nm laser, and solution stirring techniques - art. no. 646008,
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satoshi murakami.
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[Structural basis of xenobiotic recognition by a bacterial xenobiotic exporter],
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satoshi murakami.
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Application of femtosecond laser ablation for detaching grown protein crystals from glass capillary tube,
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Solution-stirring method improves crystal quality of human triosephosphate isomerase,
J Biosci Bioeng,
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Purification, crystallization and preliminary X-ray diffraction of SecDF, a translocon-associated membrane protein, from Thermus thermophilus,
Acta Crystallogr Sect F Struct Biol Cryst Commun,
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Effect of ultrasonic irradiation on protein crystallization,
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Numata, T.,
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Crystallization and preliminary X-ray analysis of the tRNA thiolation enzyme MnmA from Escherichia coli complexed with tRNA(Glu),
Acta Crystallogr Sect F Struct Biol Cryst Commun,
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Krungkrai, S. R.,
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Mori, Y.,
Kai, Y.,
Krungkrai, J.,
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Crystallization and preliminary crystallographic analysis of orotidine 5'-monophosphate decarboxylase from the human malaria parasite Plasmodium falciparum,
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satoshi murakami,
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Crystal structures of a multidrug transporter reveal a functionally rotating mechanism,
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Inaba, K.,
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Crystal structure of the DsbB-DsbA complex reveals a mechanism of disulfide bond generation,
Cell,
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Cooling-rate screening system for determining protein crystal growth conditions,
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Femtosecond laser processing of protein crystals in crystallization drop,
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Tamura, N.,
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Direct interaction of multidrug efflux transporter AcrB and outer membrane channel TolC detected via site-directed disulfide cross-linking,
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Mori, Y.,
Doi, M.,
Sugamoto, K.,
Yoshikawa, H.,
Sasaki, T..
Effect of laser irradiation on enzyme activity,
Japanese Journal of Applied Physics Part 1-Regular Papers Brief Communications & Review Papers,
Vol. 44,
No. 11,
pp. 8216-8218,
2005.
公式リンク
-
Kitano, H.,
satoshi murakami,
Adachi, H.,
Matsumura, H.,
Takano, K.,
Inoue, T.,
Mori, Y.,
Doi, M.,
Sasaki, T..
Processing of membrane protein crystal using ultraviolet laser irradiation,
J Biosci Bioeng,
Vol. 100,
No. 1,
pp. 50-3,
2005.
-
Kitano, H.,
Matsumura, H.,
Adachi, H.,
satoshi murakami,
Takano, K.,
Inoue, T.,
Mori, Y.,
Doi, M.,
Sasaki, T..
Protein cryocrystallography using laser-processed crystal,
Japanese Journal of Applied Physics Part 2-Letters & Express Letters,
Vol. 44,
No. 1-7,
pp. L54-L56,
2005.
公式リンク
-
Takeuchi, K.,
Kitano, H.,
Adachi, H.,
Mori, Y.,
Sasaki, T.,
Matsumura, H.,
Inoue, T.,
satoshi murakami,
Doi, M.,
Koga, Y.,
Takano, K.,
Kanaya, S..
Protein crystal growth using laser-processed seed crystals,
Japanese Journal of Applied Physics Part 1-Regular Papers Brief Communications & Review Papers,
Vol. 44,
No. 5A,
pp. 3177-3179,
2005.
公式リンク
-
Adachi, H.,
Niino, A.,
satoshi murakami,
Takano, K.,
Matsumura, H.,
Kinoshita, T.,
Warizaya, M.,
Inoue, T.,
Mori, Y.,
Sasaki, T..
Protein crystallization by combining laser irradiation and solution-stirring techniques,
Japanese Journal of Applied Physics Part 1-Regular Papers Brief Communications & Review Papers,
Vol. 44,
No. 3,
pp. 1365-1366,
2005.
公式リンク
-
Adachi, H.,
Matsumura, H.,
Inoue, T.,
Niino, A.,
Takano, K.,
satoshi murakami,
Mori, Y.,
Sasaki, T..
Semiautomatic protein crystallization system featuring crystallization solution preparation function,
Japanese Journal of Applied Physics Part 1-Regular Papers Brief Communications & Review Papers,
Vol. 44,
No. 8,
pp. 6302-6303,
2005.
公式リンク
-
Adachi, H.,
Niino, A.,
Takano, K.,
Matsumura, H.,
satoshi murakami,
Inoue, T.,
Mori, Y.,
Sasaki, T..
Temperature-screening system for determining protein crystallization conditions,
Japanese Journal of Applied Physics Part 1-Regular Papers Brief Communications & Review Papers,
Vol. 44,
No. 6A,
pp. 4080-4083,
2005.
公式リンク
-
安達, 宏昭,
松村, 浩由,
satoshi murakami,
高野, 和文,
井上, 豪,
森, 勇介,
佐々木, 孝友.
創晶プロジェクト(閑話休題),
日本結晶成長学会誌,
Vol. 31,
No. 2,
pp. 90-91,
2004.
-
satoshi murakami,
山口, 明人.
薬剤排出タンパク質の構造と機能 : 薬剤耐性化の克服を目指して,
バイオサイエンスとインダストリー = Bioscience & industry,
Vol. 62,
No. 5,
pp. 299-304,
2004.
-
satoshi murakami.
大腸菌多剤排出トランスポーターの結晶化と構造機能解析,
日本結晶学会誌,
Vol. 46,
pp. 17,
2004.
-
satoshi murakami,
Tamura, N.,
Saito, A.,
Hirata, T.,
Yamaguchi, A..
Extramembrane central pore of multidrug exporter AcrB in Escherichia coli plays an important role in drug transport,
J Biol Chem,
Vol. 279,
No. 5,
pp. 3743-8,
2004.
-
Adachi, H.,
satoshi murakami,
Niino, A.,
Matsumura, H.,
Takano, K.,
Inoue, T.,
Mori, Y.,
Yamaguchi, A.,
Sasaki, T..
Membrane protein crystallization using laser irradiation,
Japanese Journal of Applied Physics Part 2-Letters & Express Letters,
Vol. 43,
No. 10B,
pp. L1376-L1378,
2004.
公式リンク
-
satoshi murakami,
山口, 明人.
異物排出トランスポーターの結晶構造,ついに決まる,
蛋白質核酸酵素,
Vol. 48,
No. 1,
pp. 26-32,
2003.
-
satoshi murakami,
中島, 良介,
山下, 栄樹,
山口, 明人.
大腸菌多剤排出トランスポーターAcrBのX線結晶構造解析,
放射光,
Vol. 16,
No. 4,
pp. 204-212,
2003.
-
satoshi murakami.
多剤排出トランスポーターAcrBの結晶構造解析(<特集>構造生物学(2)),
生物工学会誌 : seibutsu-kogaku kaishi,
Vol. 81,
No. 4,
pp. 155-160,
2003.
-
satoshi murakami,
Yamaguchi, A..
[Crystal structure of bacterial multidrug efflux transporter AcrB],
Tanpakushitsu Kakusan Koso,
Vol. 48,
No. 1,
pp. 26-32,
2003.
-
satoshi murakami,
Yamaguchi, A..
Multidrug-exporting secondary transporters,
Curr Opin Struct Biol,
Vol. 13,
No. 4,
pp. 443-52,
2003.
-
satoshi murakami,
中島, 良介,
山下, 栄樹,
山口, 明人.
大腸菌多剤排出トランスポーターAcrBの結晶構造解析,
日本結晶学会誌,
Vol. 45,
No. 4,
pp. 256-261,
2003.
-
satoshi murakami,
Nakashima, R,
Yamashita, E,
Yamaguchi, A.
Crystal structure of bacterial multidrug efflux transporter AcrB,
Nature,
Vol. 419,
No. 6907,
pp. 587-593,
2002.
公式リンク
-
Nada, S.,
satoshi murakami,
Okamoto, S.,
Kubo, Y.,
Yamaguchi, A..
Monoclonal antibody that binds to the central loop of the Tn10-encoded metal tetracycline/H+ antiporter of Escherichia coli,
J Biochem,
Vol. 129,
No. 1,
pp. 87-91,
2001.
-
satoshi murakami,
Shinzawa-Itoh, K.,
Yoshikawa, S..
Crystals of bovine heart ubiquinol-cytochrome c reductase diffracting X-rays up to 2.8 A resolution at 276 K,
Acta Crystallogr D Biol Crystallogr,
Vol. 54,
No. Pt 1,
pp. 146-7,
1998.
著書
-
Ui Okada,
satoshi murakami.
Structural and functional aspects on the macrolide efflux transporter, MacB — A tripartite ABC transporter,
Therapeutic Protein Targets for Drug Discovery and Clinical Evaluation,
World Scientific,
pp. 1-23,
Oct. 2022.
-
半田宏,
伊藤武彦,
岩崎博史,
岡田典弘,
岸本健雄,
工藤明,
白髭克彦,
田中幹子,
徳永万喜洋,
広瀬茂久,
村上聡,
菊池韶彦.
ハートウェル遺伝学-遺伝子、ゲノム、そして生命システムへ-,
メディカルサイエンスインターナショナル,
Mar. 2010.
国際会議発表 (査読有り)
-
Ui Okada,
Takaaki Kato,
Li-Wei Hung,
Eiki Yamashita,
Heung-Bok Kim,
Chang Yub Kim,
Thomas C. Terwilliger,
Herbert P. Schweizer,
Satoshi Murakami.
Structural and functional analysis of multidrug RND transporters from Burkholderia pseudomallei,
Multi-Drug Efflux Systems Gordon Research Conference,
Mar. 2023.
-
Ui Okada,
Eiki Yamashita,
Arthur Neuberger,
Mayu Morimoto,
Hendrik W. van Veen,
Satoshi Murakami.
Crystal structure of tripartite-type ABC transporter MacB from Acinetobacter baumannii,
Multi-Drug Efflux Systems Gordon Research Conference,
Apr. 2019.
国内会議発表 (査読有り)
-
千菅太一,
岸川皓典,
永井瑛,
坪井一馬,
村上聡,
臼井 健郎,
橋本絢子,
新家 一男,
宮永顕正,
工藤史貴,
江口正.
放線菌Streptomyces graminofaciens A-8890が生産する マクロライド抗生物質の生合成における ポリケチド合成酵素の機能解析とエンジニアリング,
第65回天然有機化合物討論会,
Sept. 2023.
国際会議発表 (査読なし・不明)
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