論文

• Yu Liu, Takuya Kobayashi, Masayuki Iizuka, Tatsumi Tanaka, Izumi Sotokawa, Atsushi Shimoyama, Yasutoshi Murayama, Eigo Otsuji, Shun-ichiro Ogura, Hideya Yuasa. Sugar-attached upconversion lanthanide nanoparticles: a novel tool for highthroughput lectin assay, Bioorganic & Medicinal Chemistry, 21, 2832-2842, Apr. 2013.
• Yukari Fujimoto, Atsushi Shimoyama, Akinori Saeki, Naohiro Kitayama, Chika Kasamatsu, Koichi Fukase. Innate immunomodulation by lipophilic termini of lipopolysaccharide; synthesis of lipid A from Porphyromonas gingivalis and other bacteria and their immunomodulative response, Molecular Biosystem, 9, 987-996, Jan. 2013.
• Yukari Fujimoto, Atsushi Shimoyama, Yasuo Suda, Koichi Fukase. Synthesis and immunomodulatory activities of Helicobacter pylori lipophilic terminus of lipopolysaccharide including lipid A, Carbohydrate Research, 356, 37-43, July 2012.
• Yuichi Yuzawa, Hidenori Nishihara, Tsuyoshi Haraguchi, Shinji Masuda, Mie Shimojima, Atsushi Shimoyama, Hideya Yuasa, Norihiro Okada, Hiroyuki Ohta. Phylogeny of Galactolipid Synthase Homologs Together with Their Enzymatic Analyses Revealed A Possible Origin and Divergence Time for Photosynthetic Membrane Biogenesis, DNA Research, 19, (1), 91-102, Feb. 2012.
• 深瀬浩一, 藤本ゆかり, 下山 敦史, 田中克典. 細菌由来複合糖質の合成と自然免疫研究, 有機合成化学協会誌, 70, (2), 113-130, Feb. 2012.
• Atsushi Shimoyama, Akinori Saeki, Natsuko Tanimura, Hiroko Tsutsui, Kensuke Miyake, Yasuo Suda, Yukari Fujimoto, Koichi Fukase. Chemical synthesis of Helicobacter pylori lipopolysaccharide partial structures and their selective proinflammatory response, Chemistry A European Journal, 17, 14464-14474, Nov. 2011.
• Atsushi Shimoyama, Yukari Fujimoto, Koichi Fukase. Stereoselective glycosylation of 3-deoxy-D-manno-2-octulosonic acid (Kdo) with batch and microfluidic methods, Synlett, 16, 2359-2362, Sept. 2011.
• Yukari Fujimoto, Masato Iwata, Noriko Imakita, Atsushi Shimoyama, Yasuo Suda, Shoichi Kusumoto, Koichi Fukase. Synthesis of immunoregulatory Helicobacter pylori lipopolysaccharide partial structures, Tetrahedron Letters, 48, 6577-6581, Aug. 2007.
• Yukari Fujimoto, Seiichi Inamura, Akiko Kawasaki, Zenyu Shiokawa, Atsushi Shimoyama, Takashi Hashimoto, Shoichi Kusumoto, Koichi Fukase. Chemical synthesis of peptidoglycan fragments for elucidation of the immunostimulating mechanism, Journal of Endotoxin Research, 13, 3, 189-196, June 2007.
• Atsushi Shimoyama, Akiko Kawasaki, Naohiro Inohara, Yukari Fujimoto, Koichi Fukase. Synthesis of Fluorescent Probe for Intracellular Innate Immune Receptor Nod1, PEPTIDE SCIENCE 2006, 43, 155, 2006.

著書

• 藤本ゆかり, 下山敦史, 佐伯昭典, 來山直弘, 生地哲平, 隅田泰生, 筒井ひろ子, 三宅健介, 深瀬浩一. 寄生性細菌 H. pyloriおよびP. gingivalisリピドAの化学合成と免疫調節活性, エンドトキシン・自然免疫研究 15, 医学図書出版, 15, pp. 7-15, Nov. 2012.
• Yukari Fujimoto, Katsunori Tanaka, Atsushi Shimoyama, Koichi Fukase. Self and non-self recognition with bacterial and animal glycans, surveys by synthetic chemistry, Methods in Enzymology, 478, 323-342, Sept. 2010.

学位論文

• Synthesis of Helicobacter pylori Lipopolysaccharide Partial Structures for Elucidation of the Immunoregulating Function,  Thesis,  Doctor (Science),  Osaka University,  2010/03/23, 

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