論文

• M. Takagi, K. T.sriwong, A. Masuda, N. Kawaguchi, S. Fukui, H. L. V. Lan, D. Kato, T. Kitayama, M. Fujii, A. A. Koesoema, T. Matsuda. Immobilization of Baeyer-Villiger monooxygenase from acetone grown Fusarium sp., Biotech. Lett., 44, 461–471, Jan. 2022.
• M. Otsu, Y. Suzuki, A. A. Koesoema, H. N. Hoang, M. Tamura, TOMOKO MATSUDA. CO2-expanded liquids as solvents to enhance activity of Pseudozyma antarctica lipase B towards ortho-substituted 1-phenylethanols, Tetrahedron Lett., 61, 42, 152424, Oct. 2020.
• T. Hoshino, E. Yamabe, M. A. Hawari, M. Tamura, S. Kanamaru, K. Yoshida, A. A. Koesoema, TOMOKO MATSUDA. Oxidation of aromatic and aliphatic aldehydes to carboxylic acids by Geotrichum candidum aldehyde dehydrogenase, Tetrahedron, 76, 33, 131387, Aug. 2020.
• K. T.sriwong, A. A. Koesoema, TOMOKO MATSUDA. Organic-inorganic nanocrystal reductase to promote green asymmetric synthesis, RSC Advances, 10, 51, 30953–30960, Aug. 2020.
• A. A. Koesoema, D. M. Standley, S. Ohshima, M. Tamura, TOMOKO MATSUDA. Control of enantioselectivity in the enzymatic reduction of halogenated acetophenone analogs by substituent positions and sizes, Tetrahedron Lett., 18, 61, 151820, Apr. 2020.
• A. A. Koesoema, D. M. Standley, K. T.Sriwong, M. Tamura, TOMOKO MATSUDA. Access to both enantiomers of substituted 2-tetralol analogs by a highly enantioselective reductase, Tetrahedron Lett., 61, 13, 151682, Mar. 2020.
• A. A. Koesoema, D. M. Standley, T. Senda, T. Matsuda. Impact and relevance of alcohol dehydrogenase enantioselectivities on biotechnological applications, 104, 2897–2909, Feb. 2020.
• A. A. Koesoema, Y. Sugiyama, K. T.Sriwong, Z. Xu, S. Verina, D. M. Standley, M. Senda, T. Senda, TOMOKO MATSUDA. Reversible control of enantioselectivity by the length of ketone substituent in biocatalytic reduction, Appl. Microbiol. Biotechnol., 103, 9529-9541, Dec. 2019.
• A. A. Koesoema, Y. Sugiyama, Z. Xu, D. M. Standley, M. Senda, T. Senda, T. Matsuda. Structural basis for a highly (S)-enantioselective reductase towards aliphatic ketones with only one carbon difference between side chain, 103, 9543-9553, Dec. 2019.

著書

• A. A. Koesoema, T. Matsuda. Chapter 9 Application of Nonaqueous Media in Biocatalysis, Biocatalysis for Practitioners: Techniques, Reactions and Applications, Eds. G. d. Gonzalo, I. Lavandera, Wiley-VCH GmbH, p. 247-274, Apr. 2021.

国際会議発表 (査読有り)

• Kotchakorn T.sriwong, Afifa Ayu Koesoema, Ramma Kamogawa, Cinthya Soreli Castro Issasi, Mitsuru Sasaki, Tomoko Matsuda. Applications of nanotechnology in an alcohol dehydrogenase immobilization for asymmetric reduction of ketones, Biocatalysis Gordon Research Seminar, July 2022.
• Kotchakorn T.sriwong, Afifa Ayu Koesoema, Ramma Kamogawa, Cinthya Soreli Castro Issasi, Mitsuru Sasaki, Tomoko Matsuda. Applications of nanotechnology in an alcohol dehydrogenase immobilization for asymmetric reduction of ketones, Biocatalysis Gordon Research Conference, July 2022.
• Kotchakorn T.sriwong, Afifa Ayu Koesoema, Ramma Kamogawa, Mitsuru Sasaki, Tomoko Matsuda. Immobilization of Geotrichum candidum alcohol dehydrogenase on novel support materials, Biotrans2021, July 2021.
• A. A. Koesoema, Y. Sugiyama, D. Schritt, K. Yamashita, D. M. Standley, M. Senda, T. Senda, T. Matsuda. Relative Size of the Two Substituents of Ketone Does not Determine Enantiopreference of Enzymatic Ketone Reduction, biocat 2016, Aug. 2016.

国内会議発表 (査読有り)

• Kotchakorn T.sriwong, Afifa Ayu Koesoema, Tomoko Matsuda. Geotrichum candidum acetophenone reductase-inorganic nanocrystal for green asymmetric ketone reduction, 第22回生体触媒化学シンポジウム, Dec. 2020.

国際会議発表 (査読なし・不明)

• Afifa Ayu Koesoema, Yosuke Sugiyama, Dimitri Schritt, Kazuo Yamashita, Daron M. Standley, Miki Senda, Toshiya Senda, Tomoko Matsuda. The Role of Prochiral Ketone Substituent-Binding Pocket Interaction in Enantiopreference of Alcohol Dehydrogenase, ICC05-AEM2016, Sept. 2016.

国内会議発表 (査読なし・不明)

• Zhongyao Tang, Yuuki Takagi, Afifa Ayu Koesoema, Tomoko Matsuda. Expanding the Substrate Specificity of Alcohol Dehydrogenase from Geotrichum candidum NBRC 4597 toward Diaryl Ketones by Site-directed Mutagenesis, 日本化学会第104春季年会(2024), Mar. 2024.
• Zhongyao Tang, Yuuki Takagi, Afifa Ayu Koesoema, Tomoko Matsuda. Engineered Alcohol Dehydrogenase for Asymmetric Reduction of Bulky-bulky Ketones, 酵素工学研究会第 90 回講演会, Nov. 2023.
• Zhongyao Tang, Yuuki Takagi, Afifa Ayu Koesoema, Tomoko Matsuda. Biocatalytic reduction of prochiral bulky-bulky ketones by engineered alcohol dehydrogenase, Sept. 2023.
• Zhongyao Tang, Yuuki Takagi, Afifa Ayu Koesoema, Tomoko Matsuda. Improvement of Activity of Alcohol Dehydrogenase from Geotrichum candidum for Reduction of Bulky Ketones via Enzyme Engineering, 日本化学会 第103春季年会 (2023), Mar. 2023.
• 高木 裕貴, Tang Zhongyao, Koesoema Afifa, T.sriwong Kotchakorn, 大島 秀祐, 松田 知子. ケトン還元酵素の新規変異体による環境調和型選択的還元反応の開発, 第12回CSJ化学フェスタ, Oct. 2022.
• Zhongyao Tang, Yuuki Takagi, Shusuke Ohshima, Kotchakorn T. Sriwong, Afifa Ayu Koesoema, Tomoko Matsuda. Enzyme Engineering of Alcohol Dehydrogenase from Geotrichum candidum NBRC 4597 (GcAPRD) with enhanced activity and enantioselectivity, 日本化学会 第102春季年会 (2022), Mar. 2022.
• Kotchakorn T.SRIWONG, Afifa Ayu KOESOEMA, Tomoko MATSUDA. Nanoflower reductase for green asymmetric synthesis, 日本化学会 第100春季年会 (2020), 2G2-49, Mar. 2020.
• Le Viet LAN HUONG, Hiroumi NEMOTO, Haruka MAEDA, Michio TAKAGI, Mayumi TAMURA, Afifa Ayu KOESOEMA, Tomoko MATSUDA. The asymmetric synthesis of alkylaryl sulfoxides by oxidation of sulfide with a novel Baeyer-Villiger monooxygenases from Fusarium sp. NBRC 109816, 日本化学会 第100春季年会 (2020), 2PC-149, Mar. 2020.
• Afifa Ayu Koesoema, Yosuke Sugiyama, Kotchakorn T.Sriwong, Zichang Xu, Daron M. Standley, Miki Senda, Toshiya Senda, Tomoko Matsuda. Enantioselectivity mechanism of challenging aliphatic ketone reduction by acetophenone reductase from Geotrichum candidum NBRC 4597, The 21st Biocatalysis Symposium of Japan, P-31, Aug. 2019.
• Afifa Ayu Koesoema, Yosuke Sugiyama, Samantha Verina, Dimitri Schritt, Kazuo Yamashita, Daron M. Standley, Miki Senda, Toshiya Senda, Tomoko Matsuda. Substrate-Binding Cavity Specific Interaction in Reductase : Insight to Enzyme Enantiopreference and Macromolecule-Small Molecule Interaction, Mar. 2017.
• Afifa Ayu Koesoema, Yosuke Sugiyama, Samantha Verina, Dimitri Schritt, Kazuo Yamashita, Daron M. Standley, Miki Senda, Toshiya Senda, Tomoko Matsuda. Understanding the Enantiopreference of Wild Type and Mutants Oxidoreductase from Geotrichum candidum NBRC 4597, Dec. 2016.
• Samantha Verina, Afifa Ayu Koesoema, Yosuke Sugiyama, TOMOKO MATSUDA. Characterization of Geotrichum candidum Oxidoreductase Trp288Val Mutant with Excellent and Opposite Enantioselectivity from Wild Type Enzyme, Dec. 2016.
• 長島 由拡, HOANG NAM HAI, KOESOEMA AFIFA AYU, 松田知子. 動的速度論的光学分割反応に用いるラセミ化酵素の開発, Dec. 2016.

学位論文

• Control and Mechanism Elucidation of Alcohol Dehydrogenase’s Substrate Specificity and Enantioselectivity,  Thesis,  Doctor (Engineering),  Tokyo Institute of Technology,  2020/03/26, 
• Control and Mechanism Elucidation of Alcohol Dehydrogenase’s Substrate Specificity and Enantioselectivity,  Exam Summary,  Doctor (Engineering),  Tokyo Institute of Technology,  2020/03/26,   
• Control and Mechanism Elucidation of Alcohol Dehydrogenase’s Substrate Specificity and Enantioselectivity,  Summary,  Doctor (Engineering),  Tokyo Institute of Technology,  2020/03/26,   
• Control and Mechanism Elucidation of Alcohol Dehydrogenase’s Substrate Specificity and Enantioselectivity,  Outline,  Doctor (Engineering),  Tokyo Institute of Technology,  2020/03/26,   

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