論文

• B. Zhu, N. Nosaka, S. Kanamaru, J. Dong, Y. Dai, A. Inoue, Y. Yang, K. Kobayashi, T. Kitaguchi, H. Iwasaki, R. Koike, K. Wakabayashi, H. Ueda. Rapid and sensitive SARS-CoV-2 detection using a homogeneous fluorescent immunosensor Quenchbody with crowding agents, Analyst, Vol. 147, Number 22, p. 4971-4979, Nov. 2022.  公式リンク  
  
• Abe Satoshi, Tanaka Junko, Kojima Mariko, Kanamaru Shuji, Hirata Kunio, Yamashita Keitaro, Kobayashi Ayako, Ueno Takafumi. Cell-free protein crystallization for nanocrystal structure determination, Scientific Reports, Oct. 2022.
• Aleksandar Zdravković, James M. Daley, Arijit Dutta, Tatsuya Niwa, Yasuto Murayama, Shuji Kanamaru, Kentaro Ito, Takahisa Maki, Bilge Argunhan, Masayuki Takahashi, Hideo Tsubouchi, Patrick Sung, Hiroshi Iwasaki. A conserved Ctp1/CtIP C-terminal peptide stimulates Mre11 endonuclease activity, Proceedings of the National Academy of Sciences of the United States of America, National Academy of Sciences, Vol. 118, No. 11, e2016287118, Mar. 2021.  公式リンク  
  
• T. Hoshino, E. Yamabe, M. A. Hawari, M. Tamura, S. Kanamaru, K. Yoshida, A. A. Koesoema, TOMOKO MATSUDA. Oxidation of aromatic and aliphatic aldehydes to carboxylic acids by Geotrichum candidum aldehyde dehydrogenase, Tetrahedron, 76, 33, 131387, Aug. 2020.
• Kentaro Ito, Yasuto Murayama, Yumiko Kurokawa, Shuji Kanamaru, Yuichi Kokabu, Takahisa Maki, Tsutomu Mikawa, Argunhan Bilge, Hideo Tsubouchi, Mitsunori Ikeguchi, Masayuki Takahashi, Hiroshi Iwasaki. Real-time tracking reveals catalytic roles for the two DNA binding sites of Rad51, Nature Communications, Nature Research, Vol. 11, No. 1, June 2020.  公式リンク  
  
• Argunhan Bilge, Masayoshi Sakakura, Negar Afshar, Kurihara, M., Kentarou Itou, Takahisa Maki, Shuji Kanamaru, Yasuto Murayama, Hideo Tsubouchi, Masayuki Takahashi, Hideo Takahashi, Hiroshi Iwasaki. Cooperative interactions facilitate stimulation of Rad51 by the Swi5-Sfr1 auxiliary factor complex, eLife, eLife Sciences Publications, Vol. 9, No. e52566, Mar. 2020.  公式リンク  
  
• Raeyeong Kim, Shuji Kanamaru, Tsutomu Mikawa, Chantal Prevost, Kentarou Ito, Ishii Kentaro, Uchiyama Susumu, Masayuki Oda, Hiroshi Iwasaki, Seog K Kim, Masayuki Takahashi. RecA requires two molecules of Mg²⁺ ions for its optimal strand exchange activity in vitro, Nucleic Acids Research, Oxford Press, Vol. 46, No. 5, pp. 2548-2559, Jan. 2018.  公式リンク  
  
• F. Arisaka, M. L. Yap, S. Kanamaru, M. G. Rossmann. Molecular assembly and structure of the bacteriophage T4 tail, Biophys Rev, Vol. 8, No. 4, pp. 385-396, 2016.  公式リンク  
  
• T. Arai, S. Kimata, D. Mochizuki, K. Hara, T. Zako, M. Odaka, M. Yohda, F. Arisaka, S. Kanamaru, T. Matsumoto, S. Yajima, J. Sato, S. Kawasaki, Y. Niimura. NADH oxidase and alkyl hydroperoxide reductase subunit C (peroxiredoxin) from Amphibacillus xylanus form an oligomeric assembly, FEBS Open Bio, Vol. 5, pp. 124-31, 2015.  公式リンク  
  
• K. Uchida, P. G. Leiman, F. Arisaka, S. Kanamaru. Structure and properties of the C-terminal beta-helical domain of VgrG protein from Escherichia coli O157, J Biochem, Vol. 155, No. 3, pp. 173-82, 2014.  公式リンク  
  
• M. Granell, M. Namura, S. Alvira, C. Garcia-Doval, A. K. Singh, I. Gutsche, M. J. van Raaij, S. Kanamaru. Crystallization of the carboxy-terminal region of the bacteriophage T4 proximal long tail fibre protein gp34, Acta Crystallogr F Struct Biol Commun, Vol. 70, No. Pt 7, pp. 970-5, 2014.  公式リンク  
  
• T. Iwura, J. Fukuda, K. Yamazaki, S. Kanamaru, F. Arisaka. Intermolecular interactions and conformation of antibody dimers present in IgG1 biopharmaceuticals, J Biochem, Vol. 155, No. 1, pp. 63-71, 2014.  公式リンク  
  
• F. Arisaka, S. Kanamaru. Protein interactions in the assembly of the tail of bacteriophage T4, Biophys Rev, Vol. 5, No. 2, pp. 79-84, 2013.  公式リンク  
  
• K. Nozawa, R. Ishitani, T. Yoshihisa, M. Sato, F. Arisaka, S. Kanamaru, N. Dohmae, D. Mangroo, B. Senger, H. D. Becker, O. Nureki. Crystal structure of Cex1p reveals the mechanism of tRNA trafficking between nucleus and cytoplasm, Nucleic Acids Res, Vol. 41, No. 6, pp. 3901-14, 2013.  公式リンク  
  
• A. Fokine, Z. Zhang, S. Kanamaru, V. D. Bowman, A. A. Aksyuk, F. Arisaka, V. B. Rao, M. G. Rossmann. The molecular architecture of the bacteriophage T4 neck, J Mol Biol, Vol. 425, No. 10, pp. 1731-44, 2013.  公式リンク  
  
• T. Yamamoto, Y. Nakata, C. Cao, Y. Sugiyama, Y. Asanuma, S. Kanamaru, T. Matsuda. Acetophenone reductase with extreme stability against a high concentration of organic compounds or an elevated temperature, Appl Microbiol Biotechnol, Vol. 97, No. 24, pp. 10413-21, 2013.  公式リンク  
  
• F. Akita, A. Higashiura, T. Shimizu, Y. Pu, M. Suzuki, T. Uehara-Ichiki, T. Sasaya, S. Kanamaru, F. Arisaka, T. Tsukihara, A. Nakagawa, T. Omura. Crystallographic analysis reveals octamerization of viroplasm matrix protein P9-1 of Rice black streaked dwarf virus, J Virol, Vol. 86, No. 2, pp. 746-56, 2012.  公式リンク  
  
• N. Yokoi, Y. Miura, C. Y. Huang, N. Takatani, H. Inaba, T. Koshiyama, S. Kanamaru, F. Arisaka, Y. Watanabe, S. Kitagawa, T. Ueno. Dual modification of a triple-stranded ﾎｲ-helix nanotube with Ru and Re metal complexes to promote photocatalytic reduction of CO2, Chem Commun (Camb), Vol. 47, No. 7, pp. 2074-6, 2011.  公式リンク  
  
• M. L. Yap, K. Mio, P. G. Leiman, S. Kanamaru, F. Arisaka. The baseplate wedges of bacteriophage T4 spontaneously assemble into hubless baseplate-like structure in vitro, J Mol Biol, Vol. 395, No. 2, pp. 349-60, 2010.  公式リンク  
  
• Y. Nakata, T. Fukae, R. Kanamori, S. Kanamaru, T. Matsuda. Purification and characterization of acetophenone reductase with excellent enantioselectivity from Geotrichum candidum NBRC 4597, Appl Microbiol Biotechnol, Vol. 86, No. 2, pp. 625-31, 2010.  公式リンク  
  
• N. Yokoi, H. Inaba, M. Terauchi, A. Z. Stieg, N. J. Sanghamitra, T. Koshiyama, K. Yutani, S. Kanamaru, F. Arisaka, T. Hikage, A. Suzuki, T. Yamane, J. K. Gimzewski, Y. Watanabe, S. Kitagawa, T. Ueno. Construction of robust bio-nanotubes using the controlled self-assembly of component proteins of bacteriophage T4, Small, Vol. 6, No. 17, pp. 1873-9, 2010.  公式リンク  
  
• P. G. Leiman, F. Arisaka, M. J. van Raaij, V. A. Kostyuchenko, A. A. Aksyuk, S. Kanamaru, M. G. Rossmann. Morphogenesis of the T4 tail and tail fibers, Virol J, Vol. 7, pp. 355, 2010.  公式リンク  
  
• M. L. Yap, K. Mio, S. Ali, A. Minton, S. Kanamaru, F. Arisaka. Sequential assembly of the wedge of the baseplate of phage T4 in the presence and absence of gp11 as monitored by analytical ultracentrifugation, Macromol Biosci, Vol. 10, No. 7, pp. 808-13, 2010.  公式リンク  
  
• R. Danev, S. Kanamaru, M. Marko, K. Nagayama. Zernike phase contrast cryo-electron tomography, J Struct Biol, Vol. 171, No. 2, pp. 174-81, 2010.  公式リンク  
  
• Shuji Kanamaru. Structural similarity of tailed phages and pathogenic bacterial secretion systems, Proc Natl Acad Sci USA, Vol. 106, p. 4067-8, Mar. 2009.
• Shuji Kanamaru, FUMIO ARISAKA, Mai Nemoto. ORF334 in Vibrio phage KVP40 plays the role of gp27 in T4 phage to form a heterohexameric complex, J Bacteriol, vol. 190, p. 3606-12, Sept. 2008.
• Rossmann MG, Arisaka F, Battisti AJ, Bowman VD, Chipman PR, Fokine A, Hafenstein S, Kanamaru S, Kostyuchenko VA, Mesyanzhinov VV, Shneider MM, Morais MC, Leiman PG, Palermo LM, Parrish CR, Xiao C. From structure of the complex to understanding of the biology, Acta Crystallogr D Biol Crystallogr, Vol. 61, No. 1, pp. 9-16, Jan. 2007.
• Kumar Sarkar S, Takeda Y, Kanamaru S, Arisaka F. Association and dissociation of the cell puncturing complex of bacteriophage T4 is controlled by both pH and temperature., Biochim Biophys Acta., Vol. 1764, No. 9, pp. 1487-1492, Sept. 2006.
• Ueno T, Koshiyama T, Tsuruga T, Goto T, Kanamaru S, Arisaka F, Watanabe Y.. Bionanotube Tetrapod Assembly by In Situ Synthesis of a Gold Nanocluster with (Gp5-His(6))(3) from Bacteriophage T4., Angew Chem Int Ed Engl, Vol. 45, No. 27, pp. 4508-4512, June 2006.
• Sugimoto K, Kanamaru S, Iwasaki K, Arisaka F, Yamashita I.. Construction of a ball-and-spike protein supramolecule, Angew Chem Int Ed Engl, Vol. 45, No. 17, pp. 2725-2728, Apr. 2006.
• Kanamaru, S., Ishiwata, Y., Suzuki, T., Rossmann, M. G., Arisaka, F.. Control of bacteriophage t4 tail lysozyme activity during the infection process, J Mol Biol, Vol. 346, No. 4, pp. 1013-1020, 2005.
• Morais, M. C., Fisher, M., Kanamaru, S., Przybyla, L., Burgner, J., Fane, B. A., Rossmann, M. G.. Conformational Switching by the Scaffolding Protein D Directs the Assembly of Bacteriophage phiX174, Mol Cell, Vol. 15, No. 6, pp. 991-997, 2004.
• Kanamaru, S., Kondabagil, K., Rossmann, M. G., Rao, V. B.. The functional domains of bacteriophage t4 terminase, J Biol Chem, Vol. 279, No. 39, pp. 40795-40801, 2004.
• Morais, M. C. Kanamaru, S. Badasso, M. O. Koti, J. S. Owen, B. A. McMurray, C. T. Anderson, D. L. Rossmann, M. G.. Bacteriophage phi29 scaffolding protein gp7 before and after prohead assembly, Nat. Struct. Biol., Vol. 10, No. 7, pp. 572-576, 2003.
• Kostyuchenko, V. A. Leiman, P. G. Chipman, P. R. Kanamaru, S. Van Raaij, M. J. Arisaka, F. Mesyanzhinov, V. V. Rossmann, M. G.. Three-dimensional structure of bacteriophage T4 baseplate, Nat. Struct. Biol., Vol. 10, No. 9, pp. 688-693, 2003.
• Zhao, L., Kanamaru, S., Chaidirek, C., Arisaka, F.. P15 and P3, the tail completion proteins of bacteriophage T4, both form hexameric rings., J Bacteriol, Vol. 185, No. 5, pp. 1693-1700, 2003.
• Leiman, P. G., Kanamaru, S., Mesyanzhinov, V. V., Arisaka, F., Rossmann, M. G.. Structure and morphogenesis of bacteriophage T4, Cell Mol Life Sci, Vol. 60, No. 11, pp. 2356-2370, 2003.
• Arisaka, F., Kanamaru, S., Leiman, P., Rossmann, M. G.. The tail lysozyme complex of bacteriophage T4, Int J Biochem Cell Biol, Vol. 35, No. 1, pp. 16-21, 2003.
• Shuji Kanamaru. Bacteriophage phi29 scaffolding protein gp7 before and after prohead assembly, Nat. Struct. Biol., Vol. 10, No. 7, pp. 572-576, 2003.
• Shuji Kanamaru. Three-dimensional structure of bacteriophage T4 baseplate, Nat. Struct. Biol., Vol. 10, No. 9, pp. 688-693, 2003.
• Shuji Kanamaru. Structure of the cell-puncturing device of bacteriophage T4, Nature, Vol. 415, No. 6871, pp. 553-557, 2002.
• Shuji Kanamaru. The C-terminal fragment of the precursor tail lysozyme of bacteriophage T4 stays as a structural component of the baseplate after cleavage, J. Bacteriol., Vol. 181, No. 9, pp. 2739-2744, 1999.

国内会議発表 (査読なし・不明)

• Junko Tanaka, Satoshi Abe, Shuji Kanamaru, Takeshi Yokoyama, Tiezheng Pan, Misaki Nagama, Takafumi Ueno. Structure analysis of crystal and solution state of in-cell crystallized protein cage, 104th CSJ Annual Meeting, Mar. 2024.
• 田中 潤子, 安部 聡, Tiezheng Pan, 永間 美咲, 金丸 周司, 平田 邦夫, 上野 隆史. ケージタンパク質の表面設計による三次元結晶格子制御, 第72回高分子討論会, Sept. 2023.
• 田中 潤子, 安部 聡, 金丸 周司, 上野 隆史. 無細胞タンパク質結晶エンジニアリングによる構造解析, 日本化学会第102春季年会, Mar. 2022.
• 金丸周司. T2-likeファージ宿主認識蛋白質と宿主OmpCの相互作用解析, 第５７回日本生物物理学会年会, Sept. 2019.
• Alexandar Zdravkovic, Hideo Tsubouchi, Shuji Kanamaru, Hiroshi Iwasaki. Molecular mechanism of Ctp 1 mediated Mre11-Rad50-Nbs1 endonuclease activation in S.pombe, 日本遺伝学会第91回大会, Sept. 2019.
• Zdravkovic A, Tsubouchi H, Kanamaru S, Iwasaki H. Activation of Mre11 endonuclease by Ctp1, 第1回日本遺伝学会春季分科会, Mar. 2019.

その他の論文・著書など

• 金丸周司, 有坂文雄. バクテリオファージの構造と感染機構, 蛋白質 核酸 酵素, Vol. 50, No. 10, pp. 1341-1348, Aug. 2005.
• 金丸周司, 有坂文雄, Leiman PG. T4ファージ尾部基盤の構造解析と感染メカニズムの解明, 日本結晶学会誌, Vol. 45, No. 1, pp. 48-53, Mar. 2003.
• 金丸周司, 有坂 文雄. T4ファージの注射針複合体, 生物物理, Vol. 43, No. 1, pp. 21-24, Jan. 2003.
• 金丸周司, 有坂文雄. Ｔ４ファージの構造生物学と感染のメカニズム, 生化学, Vol. 74, No. 2, pp. 131-135, Feb. 2002.

特許など

• 金丸周司, 上野隆史, 岩崎博史. ヘテロタンパク質ケージ . 特許. 公開. 国立大学法人東京工業大学. 2017/11/27. 特願2017-227140. 2019/06/20. 特開2019-092481. 2019.
• 上野隆史, 稲葉　央, 深井俊宏, 有坂文雄, 金丸周司. 標的タンパク質の細胞内導入剤及び標的タンパク質の細胞内導入方法. 特許. 登録. 国立大学法人東京工業大学. 2014/02/28. 特願2014-039644. 2015/09/10. 特開2015-163056. 特許第6304683号. 2018/03/16 2018.

学位論文

• Processing and Molecular Assembly of the Tail Lysozyme, gp5 of Bacteriophage T4,  Thesis,  Doctor (Science),  Tokyo Institute of Technology,  1999/09/--, 
• アミロイド形成機構の解明をめざしたヒトリゾチーム変異体の発現、フォールディング、構造に関する研究,  薬学修士,  九州大学,  1996/03/--, 

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