Journal Paper

• Satoh, M., Tokaji, Y., Nagano, A.J., Hara-Nishimura, I., Hayashi, M., Nishimura, M., Ohta, H., Masuda, S.. Arabidopsis mutants affecting oxylipin signaling in photo-oxidative stress responses., Plant Physiol. Biochem., Vol. 81, pp. 90-95, Dec. 2013.
• Shimojima, M., Watanabe, T., Madoka, Y., Koizumi, R., Yamamoto, M. P., Masuda, K., Yamada, K., Masuda, S., Ohta, H.. Differential regulation of two types of monogalactosyldiacylglycerol synthase in membrane lipid remodeling under phosphate-limited conditions in sesame plants., Front. Plant Sci., Vol. 4, pp. 469, Nov. 2013.
• SHINJI MASUDA, Yuki Nakatani, Shukun Ren, Mikiko Tanaka. Blue light-mediated manipulation of transcription factor activity in vivo., ACS Chemical Biology, 8, 12, 2649-2653, Sept. 2013.
• Yuko Sasaki-Sekimoto, Yusuke Jikumaru, Takeshi Obayashi, Hikaru Saito, Shinji Masuda, Yuji Kamiya, Hiroyuki Ohta, Ken Shirasu. bHLH transcription factors JA-ASSOCIATED MYC2-LIKE 1, JAM2 and JAM3 are negative regulators of jasmonate responses in Arabidopsis., Plant physiology, July 2013.
• Shukun Ren, Ryoichi Sato, Koji Hasegawa, Hiroyuki Ohta, Shinji Masuda. A Predicted Structure for the PixD-PixE Complex Determined by Homology Modeling, Docking Simulations, and a Mutagenesis Study., Biochemistry, Vol. 52, 1272-1279, Feb. 2013.
• SHINJI MASUDA. Whole-genome sequence of the purple photosynthetic bacterium Rhodovulum sulfidophilum strain W4., Genome Announcements 1: e00577-13., 2013.
• Jing Chen, Kohei Sonobe, Narihito Ogawa, Shinji Masuda, Akira Nagatani, Yuichi Kobayashi, Hiroyuki Ohta. Inhibition of arabidopsis hypocotyl elongation by jasmonates is enhanced under red light in phytochrome B dependent manner, J. PLANT RES., Vol. 126, pp. 161-168, 2013.
• Awakawa, T., Sugai, Y., Otsutomo, K., Ren, S., Masuda, S., Katsuyama, Y., Horinouchi, S., Ohnishi, Y., SHINJI MASUDA. 4-Hydroxy-3-methyl-6-(1-methyl-2-oxoalkyl)pyran-2-one Synthesis by a Type III Polyketide Synthase from Rhodospirillum centenum, ChemBioChem, Vol. 14, No. 8, pp. 1006-1013, 2013.  Official location  
• SHINJI MASUDA. 4-hydroxy-3-methyl-6-(1-methyl-2-oxoalkyl)pyran-2-one synthesis by a type III polyketide synthase from Rhodospirillum centenum., ChemBioChem 14: 1006-1013., 2013.
• SHINJI MASUDA. A predicted structure for the PixD-PixE complex determined by homology modeling, docking simulation, and a mutagenesis study., Biochemistry 52: 1272-1279., 2013.
• Ren, S., Sato, R., Hasegawa, K., Ohta, H., Masuda, S., SHINJI MASUDA. A predicted structure for the PixD-PixE complex determined by homology modeling, docking simulations, and a mutagenesis study, Biochemistry, Vol. 52, No. 7, pp. 1272-1279, 2013.  Official location  
• Sasaki-Sekimoto, Y., Jikumaru, Y., Obayashi, T., Saito, H., Masuda, S., Kamiya, Y., Ohta, H., Shirasu, K., SHINJI MASUDA. Basic helix-loop-helix transcription factors JASMONATE-ASSOCIATED MYC2-LIKE1 (JAM1), JAM2, and JAM3 are negative regulators of jasmonate responses in Arabidopsis, Plant Physiology, Vol. 163, No. 1, pp. 291-304, 2013.  Official location  
• SHINJI MASUDA. Basic helix-loop-helix transcription factors JASMONATE-ASSOCIATEDMYC2-LIKE1 (JAM1), JAM2, and JAM3 are negative regulators of jasmonate responses in Arabidopsis., Plant Physiol. 163: 291-304., 2013.
• Masuda, S., Nakatani, Y., Ren, S., Tanaka, M., SHINJI MASUDA. Blue light-mediated manipulation of transcription factor activity in vivo, ACS Chemical Biology, Vol. 8, No. 12, pp. 2649-2653, 2013.  Official location  
• SHINJI MASUDA. Blue light-mediated manipulation of transcription factor activity in vivo., ACS Chem. Biol. 8: 2649-2653., 2013.
• Shimojima, M., Watanabe, T., Madoka, Y., Koizumi, R., Yamamoto, M.P., Masuda, K., Yamada, K., Masuda, S., Ohta, H., SHINJI MASUDA. Differential regulation of two types of monogalactosyldiacylglycerol synthase in membrane lipid remodeling under phosphate-limited conditions in sesame plants, Frontiers in Plant Science, Vol. 4, No. NOV, 2013.  Official location  
• SHINJI MASUDA. Differential regulation of two types of monogalactosyldiacylglycerol synthase in membrane lipid remodeling under phosphate-limited conditions in sesame plants., Front. Plant Sci. 4: 469., 2013.
• SHINJI MASUDA. Inhibition of Arabidopsis hypocotyl elongation by jasmonates is enhanced under red light in phytochrome B dependent manner., J. Plant Res. 126: 161-168., 2013.
• Chen, J., Sonobe, K., Ogawa, N., Masuda, S., Nagatani, A., Kobayashi, Y., Ohta, H., SHINJI MASUDA. Inhibition of arabidopsis hypocotyl elongation by jasmonates is enhanced under red light in phytochrome B dependent manner, Journal of Plant Research, Vol. 126, No. 1, pp. 161-168, 2013.  Official location  
• Masuda, S., SHINJI MASUDA. Light detection and signal transduction in the BLUF photoreceptors, Plant and Cell Physiology, Vol. 54, No. 2, pp. 171-179, 2013.  Official location  

Patent

• SHINJI MASUDA, Mikiko Tanaka, Yuki Nakatani. 転写因子の機能制御方法. Patent. Published. 国立大学法人東京工業大学. 2012/05/23. 特願2012-117619. 2013/12/09. 特開2013-243940. 2013. Dec.

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