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Publication List - Hiroshi Kimura 2021 (34 / 460 entries)
Journal Paper
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Matsumura Y,
Ito R,
Yajima A,
Yamaguchi R,
Tanaka T,
Kawamura T,
Magoori K,
Abe Y,
Uchida A,
Yoneshiro T,
Hirakawa H,
Zhang J,
Arai M,
Yang C,
Yang G,
Takahashi H,
Fujihashi H,
Nakaki R,
Yamamoto S,
Ota S,
Tsutsumi S,
Inoue SI,
Hiroshi Kimura,
Wada Y,
Kodama T,
Inagaki T,
Osborne TF,
Hiroyuki Aburatani,
Node K,
Sakai J.
Spatiotemporal dynamics of SETD5-containing NCoR-HDAC3 complex determines enhancer activation for adipogenesis,
Nat Commun,
12,
1,
7045,
Dec. 2021.
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Uchino S,
Ito Y,
Sato Y,
Handa T,
Ohkawa Y,
Tokunaga M,
Kimura H.
Live imaging of transcription sites using an elongating RNA polymerase II-specific probe.,
J Cell Biol,
Vol. 221,
No. 2,
p. e202104134 (23 pages),
Dec. 2021.
Official location
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Harada A,
Kimura H,
Ohkawa Y.
Recent advances in single-cell epigenomics,
Curr Opin Struct Biol,
71,
116-122,
Dec. 2021.
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Hayashi-Takanaka Y,
Hayashi Y,
Hirano Y,
Hiroshi Kimura.
MCM hexamers is associated with di-/tri-methylation of histone H4K20 toward S phase entry,
Nucleic Acids Research,
49,
21,
12152-12166,
Dec. 2021.
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Maehara K,
Tomimatsu K,
Harada A,
Tanaka Kaori,
Sato Shoko,
Fukuoka M,
Okada S,
Handa T,
Kurumizaka H,
Saitoh N,
Hiroshi Kimura,
Ohkawa Y.
Modeling population size independent tissue epigenomes by ChIL-seq with single thin sections,
Mol Syst Biol,
17,
11,
e10323,
Nov. 2021.
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Kudo H,
Matsuo M,
Satoh S,
Hata T,
Hachisu R,
Nakamura M,
Yamamoto YY,
Kimura H,
Matsui M,
Obokata J.
Cryptic promoter activation occurs by at least two different mechanisms in the Arabidopsis genome,
Plant J,
108,
1,
29-39,
Oct. 2021.
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Yuko Sato,
Masaru Nakao,
Hiroshi Kimura.
Live-cell imaging probes to track chromatin modification dynamics,
Microscopy (Oxf),
Vol. 70,
Issue 5,
Page 415-422,
Oct. 2021.
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Yang Liu,
Ning Zhao,
Masato T. Kanemaki,
Yotaro Yamamoto,
Yoshifusa Sadamura,
Yuma Ito,
Makio Tokunaga,
Timothy J. Stasevich,
Hiroshi Kimura.
Visualizing looping of two endogenous genomic loci using synthetic zinc-finger proteins with anti-FLAG and anti-HA frankenbodies in living cells,
Genes Cells.,
Vol. 26,
No. 11,
p. 905-926,
Sept. 2021.
Official location
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Yuko Sato,
Hiroshi Kimura.
Multiplexed Imaging of Posttranslational Modifications of Endogenous Proteins in Live Cells,
Methods in Molecular Biology,
volume 2350,
page 31-41,
July 2021.
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Zhang J,
Matsumura Y,
Kano Y,
Yoshida A,
Kawamura T,
Hirakawa H,
Inagaki T,
Tanaka Toshiya,
Hiroshi Kimura,
Yanagi S,
Fukami K,
Doi T,
Osborne TF,
Kodama T,
Aburatani H,
Sakai J.
Ubiquitination-dependent and -independent repression of target genes by SETDB1 reveal a context-dependent role for its methyltransferase activity during adipogenesis,
Genes Cells,
26,
7,
513-529,
July 2021.
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Yuko Sato,
Hiroshi Kimura.
Dynamic Behavior of Inactive X Chromosome Territory During the Cell Cycle as Revealed by H3K27me3-Specific Intracellular Antibody,
Methods in Molecular Biology,
volume 1342,
June 2021.
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Muraoka Y,
Nikaido A,
Kowada R,
Kimura H,
Yamaguchi M,
Yoshida H.
Identification of Rpd3 as a novel epigenetic regulator of Drosophila FIG 4, a Charcot-Marie-Tooth disease-causing gene,
Neuroreport,
32,
7,
562-568,
May 2021.
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Forero-Quintero LS,
Raymond W,
Handa T,
Saxton MN,
Morisaki T,
Kimura H,
Bertrand E,
Munsky B,
Stasevich TJ.
Live-cell imaging reveals the spatiotemporal organization of endogenous RNA polymerase II phosphorylation at a single gene,
Nat Commun,
12,
1,
3158,
May 2021.
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Mio K. Shibuta,
Takuya Sakamoto,
Tamako Yamaoka,
Mayu Yoshikawa,
Shusuke Kasamatsu,
Noriyoshi Yagi,
Satoru Fujimoto,
Takamasa Suzuki,
Satoshi Uchino,
Yuko Sato,
Hiroshi Kimura,
Sachihiro Matsunaga.
A live imaging system to analyze spatiotemporal dynamics of RNA polymerase II modification in Arabidopsis thaliana,
Communications Biology,
Volume 4,
May 2021.
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Tachiwana H,
Dacher M,
Maehara K,
Harada A,
Seto Y,
Katayama R,
Ohkawa Y,
Kimura H,
Kurumizaka H,
Saitoh N.
Chromatin structure-dependent histone incorporation revealed by a genome-wide deposition assay.,
eLife,
10,
e66290,
May 2021.
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Uchino S,
Ito Y,
Sato Y,
Handa T,
Yasuyuki Ohkawa,
Tokunaga M,
Kimura H.
Visualizing transcription sites in living cells using a genetically encoded probe specific for the elongating form of RNA polymerase II,
bioRxiv,
No. 2021.04.27,
p. 441582,
Apr. 2021.
Official location
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Yuki Ohmuro-Matsuyama,
Tetsuya Kitaguchi,
Hiroshi Kimura,
Hiroshi Ueda.
Simple Fluorogenic Cellular Assay for Histone Deacetylase Inhibitors Based on Split-Yellow Fluorescent Protein and Intrabodies,
ACS Omega,
American Chemical Society,
vol. 6,
Issue 15,
p. 10039-10046,
Apr. 2021.
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Lennart Hilbert,
Yuko Sato,
Ksenia Kuznetsova,
Tommaso Bianucci,
Hiroshi Kimura,
Frank Jülicher,
Alf Honigmann,
Vasily Zaburdaev,
Nadine L. Vastenhouw.
Transcription organizes euchromatin via microphase separation,
Nature Communications,
volume 12,
No. 1,
pp. 1360,
Mar. 2021.
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Sjoerd J D Tjalsma,
Mayako Hori,
Yuko Sato,
Aurelie Bousard,
Akito Ohi,
Ana Cláudia Raposo,
Julia Roensch,
Agnes Le Saux,
Jumpei Nogami,
Kazumitsu Maehara,
Tomoya Kujirai,
Tetsuya Handa,
Sandra Bagés-Arnal,
Yasuyuki Ohkawa,
Hitoshi Kurumizaka,
Simão Teixeira da Rocha,
Jan J Żylicz,
Hiroshi Kimura,
Edith Heard.
H4K20me1 and H3K27me3 are concurrently loaded onto the inactive X chromosome but dispensable for inducing gene silencing,
EMBO reports,
volume 22,
Issue 3,
e51989,
Mar. 2021.
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M. Hieda,
T. Matsumoto,
M. Isobe,
S. Kurono,
K. Yuka,
S. Kametaka,
J. Y. Wang,
Y. H. Chi,
K. Kameda,
H. Kimura,
N. Matsuura,
S. Matsuura.
The SUN2-nesprin-2 LINC complex and KIF20A function in the Golgi dispersal,
Sci Rep,
Vol. 11,
No. 1,
pp. 5358,
Mar. 2021.
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R. Sousa-Luテュs,
G. Dujardin,
I. Zukher,
H. Kimura,
C. Weldon,
M. Carmo-Fonseca,
N. J. Proudfoot,
T. Nojima.
POINT technology illuminates the processing of polymerase-associated intact nascent transcripts,
Mol Cell,
Vol. 81,
No. 9,
pp. 1935-1950.e6,
Mar. 2021.
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Keita Ishida,
Kanta Naruse,
Yuta Mizouchi,
Yoshihiro Ogawa,
Michio Matsushita,
Takeshi Shimi,
Hiroshi Kimura,
Satoru Fujiyoshi.
Variable immersion microscopy with a high numerical aperture,
Opt Lett,
Vol. 46,
No. 4,
pp. 856-859,
Feb. 2021.
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C. H. Ho,
Y. Takizawa,
W. Kobayashi,
Y. Arimura,
H. Kimura,
H. Kurumizaka.
Structural basis of nucleosomal histone H4 lysine 20 methylation by SET8 methyltransferase,
Life Sci Alliance,
Vol. 4,
No. 4,
Feb. 2021.
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Yusuke Fujiwara,
Yuki Yamanashi,
Akiko Fujimura,
Yuko Sato,
Tomoya Kujirai,
Hitoshi Kurumizaka,
Hiroshi Kimura,
Kenzo Yamatsugu,
Shigehiro A. Kawashima,
Motomu Kanai.
Live-Cell Epigenome Manipulation by Synthetic Histone Acylation Catalyst System,
Proceedings of the National Academy of Sciences of the United States of America,
Vol. 118,
No. 4,
Jan. 2021.
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Tada, M.,
Hayashi, A.,
Asano, Y.,
Kubiura-Ichimaru, M.,
Ito, T.,
Yoshii, M.,
Kimura, H.,
Matsuda, Y.,
Oshimura, M.,
Hiroshi Kimura.
Evidence for divergence of DNA methylation maintenance and a conserved inhibitory mechanism from DNA demethylation in chickens and mammals,
Genes and Genomics,
Vol. 43,
No. 3,
pp. 269-280,
2021.
Official location
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Hilbert, L.,
Sato, Y.,
Kuznetsova, K.,
Bianucci, T.,
Kimura, H.,
Jülicher, F.,
Honigmann, A.,
Zaburdaev, V.,
Vastenhouw, N.L.,
Hiroshi Kimura.
Author Correction: Transcription organizes euchromatin via microphase separation (Nature Communications, (2021), 12, 1, (1360), 10.1038/s41467-021-21589-3),
Nature Communications,
Vol. 12,
No. 1,
2021.
Official location
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Ohhata, T.,
Yamazawa, K.,
Miura-Kamio, A.,
Takahashi, S.,
Sakai, S.,
Tamura, Y.,
Uchida, C.,
Kitagawa, K.,
Niida, H.,
Hiratani, I.,
Kobayashi, H.,
Kimura, H.,
Wutz, A.,
Kitagawa, M.,
Hiroshi Kimura.
Dynamics of transcription-mediated conversion from euchromatin to facultative heterochromatin at the Xist promoter by Tsix,
Cell Reports,
Vol. 34,
No. 13,
2021.
Official location
International Conference (Not reviewed / Unknown)
Domestic Conference (Not reviewed / Unknown)
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Satoshi Uchino,
Yuma Ito,
Jessica Dai,
Yuko Sato,
Tetsuya Handa,
Yasuyuki Ohkawa,
Makio Tokunaga,
Hiroshi Kimura.
Visualizing transcription sites in living cells using a genetically encoded probe specific for the elongating form of RNA polymerase II,
第44回日本分子生物学会年会,
Dec. 2021.
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Satoshi Uchino,
Yuma Ito,
Yuko Sato,
Tetsuya Handa,
大川 恭行,
makio tokunaga,
Hiroshi Kimura.
リン酸化型RNAポリメラーゼII可視化プローブによる転写部位の生細胞観察,
第39回染色体ワークショップ・第20回核ダイナミクス研究会, オンライン,
Dec. 2021.
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Hiroki Ozawa,
Azusa Kambe,
Kohdai Hibi,
Hiroshi Kimura,
Nobuaki Shiraki,
Shoen Kume.
メチオニン除去培養によるエピジェネティック変化を伴うヒトiPS細胞分化促進,
第44回日本分子生物学会,
Dec. 2021.
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Yuko Sato,
Satoshi Uchino,
Yuma Ito,
前原一満,
大川恭行,
makio tokunaga,
Hiroshi Kimura.
Nuclear dynamics and transcription regulation of inactive X chromosome revealed by live-imaging probes,
第94回 日本生化学会大会,
Nov. 2021.
-
Hiroshi Kimura.
Gene regulation and chromatin dynamics in living cells,
The 79th of Annual Meeting of the Japanese Cancer Association,
Oct. 2021.
-
Hiroshi Kimura.
転写活性化に伴うヒストンアセチル化とクロマチンのダイナミクス,
第93回 日本生化学会大会,
Sept. 2021.
Patent
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