論文

• Sekijima, M., Motono, C., Yamasaki, S., Kaneko, K., Akiyama, Y.. Molecular Dynamics Simulation of Prion Protein by Large Scale Cluster Computing, Lecture Notes in Computer Science, Vol. 2858, pp. 476-485, Oct. 2003.
• Tominaga, D., Takahashi, K., Akiyama, Y.. Distributed Genetic Algorithm for Inference of Biological Scale-Free Network Structure, Lecture Notes in Computer Science, Vol. 2858, pp. 214-221, Oct. 2003.
• Kikuchi, S., Tominaga, D., Arita, M., Takahashi, K., Akiyama, Y.. Dynamic modeling of genetic networks using genetic algorithm and S-system, Bioinformatics, Vol. 19, No. 5, pp. 643-650, May 2003.
• Sekijima, M., Motono, C., Yamasaki, S., Kaneko, K., Akiyama, Y.. Molecular dynamics simulation of dimeric and monomeric forms of human prion protein (HuPrP): Insight into dynamics and properties, Vol. 85, No. 2, pp. 1176-1185, Feb. 2003.
• Suwa, M., Sato, T., Okouchi, I., Arita, M., Matsumoto, S., Tsutsumi, S., Aburatani, H., Asai, K., Akiyama, Y.. SEVENS: The Comprehensive Collection of Seven Transmembrane Helix Receptors, hunted from Human genome, Nucleic Acid Research, Vol. 31, No. 1, pp. Collection Entry #373, Jan. 2003.
• Noguchi, T., Akiyama, Y.. PDB-REPRDB: a database of representative protein chains from the Protein Data Bank (PDB) in 2003, Nucleic Acids Research, Vol. 31, No. 1, pp. 492-493, Jan. 2003.
• Kadota, K., Tominaga, D., Akiyama, Y., Takahashi, K.. A critical assessment of the effect of outliers on sample classifications, Chem-Bio Informatics Journal, Vol. 3, No. 1, pp. 30-45, Jan. 2003.

国際会議発表 (査読なし・不明)

• Akiyama, Y.. Bioinformatics research activity at CBRC - Deep computing with a 1040-CPU PC cluster, Symposium on Bioinformatics 2003, Sept. 2003.
• Akiyama, Y.. Large-scale parallel computing for systematic biological analysis, Seoul Symposium on Systems Biology (SSSB2003), Apr. 2003.

その他の論文・著書など

• 秋山 泰. バイオインフォマティクスが必要とする計算機環境, 蛋白質 核酸 酵素, Vol. 48, No. 9, pp. 1306-1312, Sept. 2003.

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