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大上雅史 2014年 研究業績一覧 (18件 / 351件)
論文
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Ohue, M.,
Shimoda, T.,
Suzuki, S.,
Matsuzaki, Y.,
Ishida, T.,
Akiyama, Y..
MEGADOCK 4.0: an ultra–high-performance protein–protein docking software for heterogeneous supercomputers,
Bioinformatics,
Oxford University Press,
Vol. 30,
No. 22,
pp. 3281-3283,
Aug. 2014.
公式リンク
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Masahito Ohue,
Yuri Matsuzaki,
Nobuyuki Uchikoga,
Takashi Ishida,
Yutaka Akiyama.
MEGADOCK: An all-to-all protein-protein interaction prediction system using tertiary structure data,
Protein and Peptide Letters,
Bentham Science,
Volume 21,
Issue 8,
Page 766-778,
June 2014.
公式リンク
著書
国際会議発表 (査読なし・不明)
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Masahito Ohue,
Takehiro Shimoda,
Shuji suzuki,
Yuri Matsuzaki,
Takashi Ishida,
Yutaka Akiyama.
MEGADOCK 4.0: an ultra–high-performance protein-protein docking software for heterogeneous supercomputers,
GIW/ISCB-Asia 2014,
Dec. 2014.
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Yuri Matsuzaki,
Nobuyuki Uchikoga,
Masahito Ohue,
Takashi Ishida,
Yutaka Akiyama.
Prediction of protein-protein interactions based on tertiary structures and transcription information,
Biophysical Society 58th Annual Meeting,
Feb. 2014.
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Nobuyuki Uchikoga,
Yuri Matsuzaki,
Masahito Ohue,
Takatsugu Hirokawa,
Yutaka Akiyama.
Re-docking scheme to explore docking search space by using interaction profiles,
Biophysical Society 58th Annual Meeting,
Feb. 2014.
国内会議発表 (査読なし・不明)
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Masahito Ohue,
Takehiro Shimoda,
Shuji Suzuki,
Yuri Matsuzaki,
Takashi Ishida,
Yutaka Akiyama.
The MEGADOCK Project: high-performance protein-protein interaction prediction tools on supercomputing environments,
The Asia hub for e-drug discovery symposium 2014 (AHeDD' 2014),
Nov. 2014.
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Masahito Ohue,
Takehiro Shimoda,
Shuji Suzuki,
Yuri Matsuzaki,
Takashi Ishida,
Yutaka Akiyama.
MEGADOCK 4.0: an ultra-high-performance protein-protein docking software for heterogeneous supercomputers,
IIBMP2014,
Bioinformatics,
Volume 30,
Issue 22,
page 3281-3283,
Nov. 2014.
公式リンク
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大上雅史,
松崎由理,
石田貴士,
秋山泰.
タンパク質とペプチドのドッキング計算,
生命情報科学若手の会 第6回研究会,
Oct. 2014.
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大上雅史,
松崎由理,
内古閑伸之,
石田貴士,
秋山泰.
MEGADOCK: a high-performance protein-protein interaction prediction tool on supercomputing environments,
第52回日本生物物理学会年会,
Sept. 2014.
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Masahito Ohue,
Takehiro Shimoda,
Shuji Suzuki,
Yuri Matsuzaki,
Takashi Ishida,
Yutaka Akiyama.
The MEGADOCK Project: high-performance protein-protein interaction prediction tools on supercomputing environments,
Biophysical Society Thematic Meeting Modeling of Biomolecular Systems Interactions, Dynamics, and Allostery: Bridging Experiments and Computations,
Sept. 2014.
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内古閑伸之,
松崎由理,
大上雅史,
広川貴次,
秋山泰.
Analysis of properties of protein-protein interaction surface areas involved in more near-native conmplexes by Re-docking scheme,
第52回日本生物物理学会年会,
Sept. 2014.
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大上雅史.
立体構造情報に基づくタンパク質間相互作用ネットワーク予測,
第3回育志賞研究発表会,
Aug. 2014.
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大上雅史,
下田 雄大,
松崎由理,
石田貴士,
秋山泰.
大規模GPUクラスタによるタンパク質ドッキング計算システム,
研究報告バイオ情報学(BIO),
一般社団法人情報処理学会,
Vol. 2014-BIO-38,
No. 32,
pp. 1-4,
June 2014.
公式リンク
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大上雅史,
下田雄大,
松崎由理,
内古閑伸之,
鈴木脩司,
石田貴士,
秋山泰.
MEGADOCK 4.0: mega-dock per dayへの道のり,
生命情報科学若手の会 第5回研究会,
Feb. 2014.
学位論文
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Protein-Protein Interaction Network Prediction Based on Tertiary Structure Data,
Exam Summary,
Doctor (Engineering),
Tokyo Institute of Technology,
2014/03/26,
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Protein-Protein Interaction Network Prediction Based on Tertiary Structure Data,
Summary,
Doctor (Engineering),
Tokyo Institute of Technology,
2014/03/26,
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Protein-Protein Interaction Network Prediction Based on Tertiary Structure Data,
Thesis,
Doctor (Engineering),
Tokyo Institute of Technology,
2014/03/26,
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